SimpleSearch - Line and FST details


Line specific information

 
Line ID 225C11
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12002
Note

Gene hit At3g23480

 
Sequence (A. th genome BLAST matches underlined) 
>83-K014239-022-225-C11-8409
NTGATCCATGTAGATTTGCCCGACATGAAGCACTTTACAATTGAACATATCGCTATGGGA
TCCTCCCTATAGCTGAGATAACAAGAAAATTAATTCTCAAGCACGTACAAGGTCATAATG
ACTATAAACGTTCCTTCGAGCTTGAGTTAAAGTGTTCTGTCTACAGACATGCTTTACATA
ATATGTTGCATATGCTAAGCTGGCAGTTATAAACACTGGTGTCCACCATCCCCTGTAAGG
TAAAAAAACACAAGTGATCGCTTACGAAATAAAGATAGCATCCCAAGCGTAAAACTCTTT
ATGGAGAAAGTTGTAAGGATCTACCTTTTCTTGGCAAGGCTAGATTCTCGTGAGTTCAAG
TCTCTGCTTGCAATGAGAATCTGTAGATGAAAACCATTATAAATAACTCGAACAATCGAA
GAAGTAAGTGCCTATGCTTCTACAACTGTATATTATGTACCATAATCAGATCCAAGAGTC
CTGAGTCTTTATCGACGAAAGAAAAATCTCCATTGATATAAGCATCTGCAAGTACTAAAT
CTGCTATGGGATCCTTC
GenBank Accession FR806084 [GenBank]
Graphic View Graphic view of gene At3g23480
Predicted Position of Insertion Chr3:8421174 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MEE5
Hit Gene Code At3g23480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclopropane-fatty-acyl-phospholipid synthase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g54680

 
Sequence (A. th genome BLAST matches underlined) 
>83-K014243-022-225-C11-8409
TTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCTTTTTGA
TTAAGCCATTTACAAGAAGAGAAGAAGAAAACTGTTGGAGGAGACGAATTGGGGAATCTT
GGAATCCAGAGAAATTAGAGTGGTTTTCACGCGCACTCTTCCTTTTTTTTTGGGCTTTCC
AAGGCCCATCATACCAAGGGTTTTTATTTTATTTGTTAGTTTATTTTTAATTCATTTTAC
GTGTTTTTATTTTATTTTATGTGTTACATCATCATATATATATTAAATCAAATATCAATA
CATTTTACAACAAACTTAACTAATCAGGGCATTAACCTATGGGATCCTCC
GenBank Accession FR806085 [GenBank]
Graphic View Graphic view of gene At5g54680
Predicted Position of Insertion Chr5:22217116 - go to primer design
BLAST e Value 7e-49
Hit Clone Code (BAC ID) MRB17
Hit Gene Code At5g54680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status failed, line belongs to a contamination group, please check line 464D02


Last Updated on 10.06.2021 13:37