SimpleSearch - Line and FST details


Line specific information

 
Line ID 226E12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 95486, 95487
Note

Gene hit At5g11220

 
Sequence (A. th genome BLAST matches underlined) 
>93-K014261-022-226-E12-8409
TGATCCATGTAGATTNTCCCGACATGAAGCACTTTACATTTTATTTTTTCGATTTAATCC
AGTACCCAAATCTCTGTATTATTCTATGGGATCCTCCCTATAGTGAGACTATGGGATCCT
CCCTATAGGGAGACTTTGGAATCCTCCTATAGTGAGGCTATGGGATCCTCCCTATAGGGA
GCTAAGGCAACCTCCGTAGAGAGAGATGTTATGCATGACGCTGTGGGCGGGGATAATCTC
TACAACAACAACTTATTGCCATGATCTCATGGTCTATGGGGTTGGAACGCCATGGGATCC
TCCCTATAGAGAG
GenBank Accession AL761558 [GenBank]
Graphic View Graphic view of gene At5g11220
Predicted Position of Insertion Chr5:3577298 - go to primer design
BLAST e Value 8e-24
Hit Clone Code (BAC ID) F2I11
Hit Gene Code At5g11220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit K15I22

 
Sequence (A. th genome BLAST matches underlined) 
>93-K014265-022-226-E12-8409
TGATCCATGTAGATTTCCCCGACATGAAGCACTTTACATTTTATTTTTTCGATTTAATCC
AGTACCCAAATCTCTGTATTATCCTATAGCATCCTCCCTATAGTGAGAGACCAACCT
GenBank Accession AL761559 [GenBank]
Graphic View Graphic view of sequence AL761559 of line 226E12
Predicted Position of Insertion Chr5:18631903 - go to primer design
BLAST e Value 5e-16
Hit Clone Code (BAC ID) K15I22
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37