SimpleSearch - Line and FST details


Line specific information

 
Line ID 231D11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 42389, 84353, 84354
Note

Gene hit At5g38430

 
Sequence (A. th genome BLAST matches underlined) 
>84-K014313-022-231-D11-8409
CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTGCAT
TATGAGACTCCTGTCATTTACGCGCTGTAATACGGCAGCAGACCCGCCGCAGCGGCTTCA
TTCTGCGGATCTATATGCTAGTACCTGGATACTCCAGGAGAGAAGGTCAACACTGACATT
ACTTCCATTACAAGCAATGGTGGAAGAGTAAAGTGCATGGTGACGGTGTTCGGCATTCTG
AATCTCACCGAGGACTCCTTCTTCGATGAGAGCCGGCGGCTATGGGATCCTCCCTTAGGT
GAG
GenBank Accession FR806204 [GenBank]
Graphic View Graphic view of gene At5g38430
Predicted Position of Insertion Chr5:15385148 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) MXI10
Hit Gene Code At5g38430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribulose bisphosphate carboxylase (small chain) family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g60580

 
Sequence (A. th genome BLAST matches underlined) 
>84-K014317-022-231-D11-8409
CTGATCCATGTAGCATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCCGAGCTT
AAAACTTTCCTGTTTTTACACCCGAAATAGCAGAGACGCAACGCAGCTGTCTTTTTTTGT
CTATTCCTATGGGATCCTCCCTATAGTGAGAGAAGGTCAACACTGACATTACTTCCATTA
CAAGCAATGGTGGAAGAGTTAACTGCATGGTGACAGCTGTCTAGCATTCTGAATCTCACC
GAGGACTCCTTCTTAGATGAGAGCCGCCCCCTATGGCATCCTCCCTATTAATAGATACAG
TGCCACACGTTGACATAATATTTGTCACATCCAAACCCCTATGGTCATTCTTCTCTATGG
CCGACTATGAGAATCTGCCTATACATAGACCGACACTTTCTGGAGCTACAAAGATAGTCA
TTACATCGTCCGCACCACATCACAACATTCCTCCTA
GenBank Accession AL937977 [GenBank]
Graphic View Graphic view of gene At3g60580
Predicted Position of Insertion Chr3:22393636 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) T8B10
Hit Gene Code At3g60580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2H2-like zinc finger protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37