SimpleSearch - Line and FST details


Line specific information

 
Line ID 238A02
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 11781
Parent of pair(s) none
Note

Gene hit At5g57130

 
Sequence (A. th genome BLAST matches underlined) 
>09-K014368-022-238-A02-8409
NATTTGATCATGTAGATTTCCCGGACTGAAGCACTTACAATTGAGAAACATAAAAACAAA
ACTTTTCCATTAATAAAACATCGAAAGATAAAAAGATCAAAACTTAACAAAATGTTGAAG
GTTTTGTTAAGAAACCTGAGCATGGCCTCTTCTCCTATGGGATCCTCCCATTAGTGAG
GenBank Accession AL938819 [GenBank]
Graphic View Graphic view of gene At5g57130
Predicted Position of Insertion Chr5:23145469 - go to primer design
BLAST e Value 1e-16
Hit Clone Code (BAC ID) MUL3
Hit Gene Code At5g57130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Clp amino terminal domain-containing protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit T19N18

 
Sequence (A. th genome BLAST matches underlined) 
>09-K014364-022-238-A02-8409
TTTGATCCATGTAGACTTTCCCGGACATGAANGCCTTTACAAGTGAAACATTACAGACCA
TTCGCCATAATACATTTCTATATGGGTCTTCATATACTCCACTAAATTGGCACTACCATT
CGGTTGCTACAGGCATGACTACATACAATGAGCTATGGGATCCTCCCATATAGTAGAGGG
ATCCTCCCTATAGTGAG
GenBank Accession FR806306 [GenBank]
Graphic View Graphic view of sequence FR806306 of line 238A02
Predicted Position of Insertion Chr5:1265250 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T19N18
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37