SimpleSearch - Line and FST details


Line specific information

 
Line ID 240D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N422986)
Segregation Analysis 100:79:56
Confirmed for Hit At5g44790
Parent of DUPLO pair 12600
Parent of pair(s) none
Note

Gene hit At1g16410

 
Sequence (A. th genome BLAST matches underlined) 
>44-K014370-022-240-D06-8409
TGATCCATGTAGATTTCCCGGACATGAAGCCCCCAAAACTCAAGACCGATCTTGCCATGC
TGCGCTCCTGCCCCCAAGAAGGCCCATCCTCGGCAATCTACCCGAACTATTCATGACTCG
TCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession CT026197 [GenBank]
Graphic View Graphic view of gene At1g16410
Predicted Position of Insertion Chr1:5608994 - go to primer design
BLAST e Value 1e-16
Hit Clone Code (BAC ID) F3O9
Hit Gene Code At1g16410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome p450 79f1
Insertion Classification CDSi
Confirmation Status failed

Gene hit At5g44790

 
Sequence (A. th genome BLAST matches underlined) 
>91-K020163-022-240-D06t-8409
ATTTTCCTGGTGATTGCTGATCCTGTATATCATTGTTGTGGTGTGGGGTTCAAGTTATGT
TAATGAAAGTATGGTGACTGGTGAATCAGTTCCTGTATCAAAAGAGGTTGATTCACCAGT
AATCGGGGGTACTATTAATATGCATGGTGCTCTTCACATGAAAGCTACAAAGGTGGGATC
TGATGCAGTTCTGAGCCAGATTATTAGTTTGGTCGAGACCGCCCAAATGTCAAAAGCTCC
TATTCAGAAATTTGCGGATTATGTAAGTATATTAGATAAACATGTCAATAAGCGTGTCAT
CCATTGGTGTTATTGCTTGTTCCTTTGGGATATACTCATTAGCAAGGACACAAACTTACC
CTGGCTTGTCCAATTTTCAGGTTGCAAGTATTTTTGTTCCGGTAGTGATTACTTTGGCAT
TGTTCACCTTAGTAGGCTGGTAAGACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX530843 [GenBank]
Graphic View Graphic view of gene At5g44790
Predicted Position of Insertion Chr5:18078024 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K23L20
Hit Gene Code At5g44790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX530842 [GenBank]


Last Updated on 10.06.2021 13:37