SimpleSearch - Line and FST details


Line specific information

 
Line ID 253F12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 11961
Parent of pair(s) none
Note

Gene hit At4g32390

 
Sequence (A. th genome BLAST matches underlined) 
>94-K014578-022-253-F12-8409
TTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGATATATGCGGTGAGA
GAGTCTGTCTAATGTAGCGAGCGAGAGGGTTGGCGTGACTGTGCTATGGCCTAAAGGTGT
TTTTTTCTTTCCAATTTACTAATGGGCTTATCTATAGGCCCACTAACTTATTTACTGTTT
AATTAATCACTTACCTCTTTTTATTGACTAATTTTGATAGGTTGGTGCAGTTTGTGAATA
TTAAATTCAATATGAATTAAATTACTTGTTTACATTAACTATTTATAACTATAAATATGC
ATCTTTTAATCTTATTAGTAGTCAATGGTTGTTATAAGTCAACATTACTTTGTTAAAAGA
GTGAAACTTATCTTTTTTTCCTTAATAATTCATATAGTTTTTGTTTTGGGTTCAAACATT
TGGTGGCCTTTCATGTTAAGTTTCCTATGGGATC
GenBank Accession AL940974 [GenBank]
Graphic View Graphic view of gene At4g32390
Predicted Position of Insertion Chr4:15636436 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F8B4
Hit Gene Code At4g32390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide-sugar transporter family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g49140

 
Sequence (A. th genome BLAST matches underlined) 
>94-K014574-022-253-F12-8409
TTGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACAATTGAATATATCCTGCCGAG
GCAACAGTCAGAGACCGATCCTGTGGAAATTACAGATTCTGAATATTCCGGGTGACTTTA
TTAACGTAGATCTCACATTCATACTATGCACTGTGCTACTCGGGATCCTCCCTATAGTGA
GGAGTAAAAGATGGCCCCCTTACCGCTTTTCCAACAAGTAAAACATGCCCAGGTCGGCCT
CACGGTCTAAAAC
GenBank Accession FR806553 [GenBank]
Graphic View Graphic view of gene At3g49140
Predicted Position of Insertion Chr3:18215063 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) T2J13
Hit Gene Code At3g49140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37