SimpleSearch - Line and FST details


Line specific information

 
Line ID 255G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N424464)
Segregation Analysis 100:96:85
Confirmed for Hit At1g52920 At4g22720
Parent of DUPLO pair 12691
Parent of pair(s) none

Gene hit At1g52920

 
Sequence (A. th genome BLAST matches underlined) 
>63-K014580-022-255-G08-8409
TTTCCCGGATCTGTGAAGCTTCTCTGAGAATGATTTGTACGGAAGTGATAGCAGTTTCGT
CAACGAATCTTTACATTCGGTAACAGTTTCTTCTTCTCCGGATAAATCTTCCGGTACAAA
CTCCGGCATCTCATTTCGGAAAAACCGTTCTCCCATATCTCTCTTTCTCTCAGCGGTTGC
TGCAGAGGACCGCGAAGAACAGAGACTAACGACGAAGTGACGAAGTGACACATCGTTACC
ATTATTAATGGGCCTTAAGTTAAGCCCAATAATGACCGGCCCATGATTTTTTCTCTCTGT
TTCGTCTCTGACCTTAAAACACTTGCTAAAACCCTATGGGATCCTC
GenBank Accession AL941226 [GenBank]
Graphic View Graphic view of gene At1g52920
Predicted Position of Insertion Chr1:19710901 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14G24
Hit Gene Code At1g52920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation G protein coupled receptor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g22720

 
Sequence (A. th genome BLAST matches underlined) 
>63-K014576-022-255-G08-8409
TGATCCATGTAGATTTCCCGGACATGAAGCCTTTACAGAGAATATTTGATACCTCTGTTA
ATTAGAGTATAGTCGCGCAGCCTTAAATCGATATAGTTATATTGCTATGCGCGTCAACTG
TTTGGACTATAACTCGCTAGTGACACTTGGAATATACGATGGAGACACTAACGTTGCTAG
ACTCCCTTTAGATACAAAGCATCAAAACTCCAAACACATATCAAGAAAAGGAAACTTTAA
ACAAGAAAACTCAATACAACATCCTTCTTACTTAAGCTGTGTAGAGATCTGGATCGGACA
ACCTTGGAACAGGAATAGCCACAAGTGGAGACTTCAACTTAAGAACAAGACCAAACTTCT
CTTCAACCTCAAACTTCTGTCCTTGAGGAGCTTTCCAATCAAAAGAGTGAAGAAGTGAAG
CAATGTTGAACAGAACAAGTCTCTCAGCCATGTTTATCGCCGCACAAATCCTCCTTCCTG
ACCCAAAAGGCAAATACTTAAAATCACCTCCATTGAAATCAAGCGAATTCTCCAAAAACC
TCTCAGGTTTGAACTCGTTTGGTTCATCCCAATTCTTAGGATCTCTATGAATCGCCCACA
CGTTGATGAAAATCTTGGAGTCTTTACGCACAGTGGATCCCGCAACCACCGAGGTTTCCG
CTGCTTCTGTGAAGGACCCAGAAGAGAAAGCGTA
GenBank Accession BX649803 [GenBank]
Graphic View Graphic view of gene At4g22720
Predicted Position of Insertion Chr4:11936831 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T12H17
Hit Gene Code At4g22720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Actin-like ATPase superfamily protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37