SimpleSearch - Line and FST details


Line specific information

 
Line ID 257C04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 7118, 93080, 93081
Note

Gene hit At3g51070

 
Sequence (A. th genome BLAST matches underlined) 
>27-K014921-022-257-C04-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGCACAT
GCACATGCACATGCACATGATATCTACTTTCATGCATTTTACGTAGCTAGGTTTGCTTAT
CGAACATATAAAAAACTGAGTGAGTGATATGGAAGGGTGATAGCGATACTCCTCTAGAAT
ATCATGATGATACTGAGCGGTTTCCCTAAGGCATACTGCGATAAATATGCTATAGAGGCG
GATATGGGACTTTCAATCTCGTGTCTCTAAATTTAGGGATGGACTCTGTGTACCGTATTA
CGCTGTCCATGAAAAATTAGAGCCATGTAAACCAATGTCAACTTGTAACGCCTA
GenBank Accession AL941402 [GenBank]
Graphic View Graphic view of gene At3g51070
Predicted Position of Insertion Chr3:18969095 - go to primer design
BLAST e Value 6e-31
Hit Clone Code (BAC ID) F24M12
Hit Gene Code At3g51070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit T16K5

 
Sequence (A. th genome BLAST matches underlined) 
>27-K014918-022-257-C04-8409
NTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGCACAT
GCACATGCACATGCACATGATATCTACTTTATGCATTTTACGTAGCTATGGAATCCTCCT
ATAGTGAGAANNGNNCNANNNCCCTTACGTCGGGGGAAATATACATGGGTCCGCTTGCTT
CGAAGACATGGGAGGAACGACTTCTTTTTCCACGATGCTCCTCGTGGGAGGGGG
GenBank Accession AL941401 [GenBank]
Graphic View Graphic view of sequence AL941401 of line 257C04
Predicted Position of Insertion Chr3:18430891 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) T16K5
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37