SimpleSearch - Line and FST details


Line specific information

 
Line ID 258C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N424705)
Segregation Analysis 50:6:5
Confirmed for Hit At1g02405
Parent of DUPLO pair none
Parent of pair(s) 66625, 96232

Gene hit At5g26240

 
Sequence (A. th genome BLAST matches underlined) 
>67-K014919-022-258-C09-8409
ATGAGGTTATCTTTAGGATGTCCTAGCTATGGGATCCTCCCCTATNAGNGAGANNNGGTT
ACACTGCTCTTTGCAATTCTCACCCTATGTTTACACTACTAATACCGACATTCTAGCTTC
CGGTTGAAACACCGCCGCTCTCGCGTTTGTTTCCCCCTATGGCGGGACGCT
GenBank Accession AL941498 [GenBank]
Graphic View Graphic view of gene At5g26240
Predicted Position of Insertion Chr5:9190975 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) T19G15
Hit Gene Code At5g26240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chloride channel D
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g02405

 
Sequence (A. th genome BLAST matches underlined) 
>67-K014922-022-258-C09-8409
TTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTGCAC
CATCGCCTTTGCCGCCACCGCCACCTCCACCTCCACCTAATTACGTATTACATATCCGCC
GGGAGACTTGTACCCTATTGAAAATTACTATGGAGCGGCTGTGGCAGTAGAAACTTTTTC
GGTGATGAAGCTGGNTCGTGTTTGAGTTATGGTTTTTCTGATTCTTTGATTATGATCAGA
AATTATTATGTTGTTGTTTTCGAACTTCTATAAGGTTTGCATAAAGATTTTGTTTACTTT
TAACGGATTGGCGTATGCTTTAGATACAGTTTTTTTTAATAATTATAATCGATTGTGGAT
TAATTTTTATAGTTAGGGTCAGATGTGGTTCATATTATTTGGACTTGTCCCCTGCAACCT
TTTATAAAACCTTCAAATGAAATCAAGCATACCTATGGGATC
GenBank Accession AL941499 [GenBank]
Graphic View Graphic view of gene At1g02405
Predicted Position of Insertion Chr1:490272 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T6A9
Hit Gene Code At1g02405 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation proline-rich family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37