SimpleSearch - Line and FST details
Line specific information
| Line ID | 258E07 |
| Vector Used | pAC161 |
| Line Availability | line died - no seeds available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12070 |
Gene hit At3g50910
| Sequence (A. th genome BLAST matches underlined) | >53-K014922-022-258-E07-8409 TTGATCCATGTAGTATTTCCCGGACATGAATCCATTTACGTCTGCCACTCGTGAGAAGAA AGCTGGTTGTCATTATCTCTCAGCTGTTCATTCTCTTGTAATCTGGTAAGACCTCTCCTA AATGTGTCTACTACCATTCCACCACGCGTGCGCTAATGCTCCTGTATACCAACTACTGTT GCATGCGTCGCCTACACTCCCTATACCCTATACTTACTTAATATCTACTCCTTAAGAGAT GCTTCAGATCGATGTATTGGCTGCATGAATGTAAGACCATGCCAATGCCGCGCTTCCTAT GGGATCCT |
| GenBank Accession | AL941523 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:18922162 - go to primer design |
| BLAST e Value | 7e-18 |
| Hit Clone Code (BAC ID) | F18B3 |
| Hit Gene Code | At3g50910 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | netrin receptor DCC |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit At5g17550
| Sequence (A. th genome BLAST matches underlined) | >53-K014919-022-258-E07-8409 CTGATCCATTGTAGATTTCCCGGACATTGCTGATACTTCGATCATTAGTGAATTAGTTTT GTTTTTATGATTTCTCATTTCATAATTTCCATGTTTTTGTTTAGGACTTGGAGTCGATAG TGGACACGATGATGCAACAGCTGTTATCGAAGGATATTCTTCACGAACCAATGAAAGAGA TTGGTGCAAGATACCCAAAATGGCTTATGGGATCCTCC |
| GenBank Accession | AL941522 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr5:5787237 - go to primer design |
| BLAST e Value | 7e-80 |
| Hit Clone Code (BAC ID) | K10A8 |
| Hit Gene Code | At5g17550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | peroxin 19-2 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |




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