SimpleSearch - Line and FST details


Line specific information

 
Line ID 258F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N424740)
Segregation Analysis 50:4:2
Confirmed for Hit At1g31880
Parent of DUPLO pair none
Parent of pair(s) 96853, 96854

Gene hit At1g31880

 
Sequence (A. th genome BLAST matches underlined) 
>62-K014922-022-258-F08-8409
TTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACANTAGAATATATCCTGCATCC
ATTTACAGACGGAGGTGAACAAGTACAACATGGAGCGCGTGGAGGCACCACTCCCAATAC
TATAGAAGCCGTCAAAAGCCTAACCATTCATGTCTCTCTCTTCTTTCTTTGCTGATCCTT
CCTCTGATTATATATTATTTCACTTTATTATATTGCTTTTCTCTAACTGCCTTGCTCGCG
AAACAAACAAAGACACAAACCCCAATTAACGTATCTTATAGGACTTAAAAAGGGTCCATA
TATTTGACTATGATTCGTTATCTTTACCAGACAATAGAGTATGAAGCCATTACTATATAG
AGGTTACTGATGTGTAGGACAGACATCATACGATGAGGCACTTACACTTGATTTTTTGGA
ATCTTTCACCAATCTCTCTTTAATAGTTTTCATGTCAGTGTCTGCTTCCTCTCTATGTGA
CTAGACATATGAAAGTCNAAAACAACTACTGAAACAATATANACCCTCATTGCACATATC
CTTGAATTATGTAGCCAGCTGAATTATCAGGACTCTCATTAAAGCTTATATTGGGGTCAT
ACTTTGATGAAAATTGCTAGTGAAGCTTGATCTAAATACCTTTCTCTCAGAAAGCTTTAG
GGGATTCTTACCTA
GenBank Accession AL941537 [GenBank]
Graphic View Graphic view of gene At1g31880
Predicted Position of Insertion Chr1:11447825 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5M6
Hit Gene Code At1g31880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL941536 [GenBank]


Last Updated on 10.06.2021 13:37