SimpleSearch - Line and FST details
Line specific information
| Line ID | 259H04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N424856) |
| Segregation Analysis | 50:29:21 |
| Confirmed for Hit | At1g09490 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6371, 6375, 11046, 87577, 87619, 87624, 87630, 87634 |
Gene hit At1g09490
| Sequence (A. th genome BLAST matches underlined) | >32-K014923-022-259-H04-8409 NTTTTGATCCCATGTAGATTTCCCGGGACATGAAGCCTTTACAATTGAATATATCCTGTA GACTCCTTCAGCCAATGGCAGATACATCATCGATGGTCCAAATATGAGTGTAAACGACAT TATAGACATTCTTCGGAAGCTGTTCCCAGATTTGTCTATTGCTGATACGTGAGATCTCTT TCCCTATGGGATCCTCCCTTNAAGTGAG |
| GenBank Accession | AL941679 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:3065466 - go to primer design |
| BLAST e Value | 2e-65 |
| Hit Clone Code (BAC ID) | F14J9 |
| Hit Gene Code | At1g09490 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD(P)-binding Rossmann-fold superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K17N15
| Sequence (A. th genome BLAST matches underlined) | >32-K014916-022-259-H04-8409 TTTCTCGGAATGAAGCCTTTACATTGAATATATCCTGACAGCGCCTTGAACGCAAAGCCT GGATCCTCGTATGGGATCCTCCCTATAGTGAGAACATTATATACGATCCTCGGAATCTGG AGCCAGATTTGTCTATTGCTGATACGTGAGATCTCTTTCCCTAGATAAAAAAATAGAACC TCATTCGTGATTTGTAATTATAGAAAGTCTGGAAAACATAAAACATCTTTTTGGGTATAC AAACTAACCACCAAGACTGAGTGATTACAGTGAAGAGTCTCCTGGTATGGGATCCTCCCT TGAAAGAGTTGAGAGTATAGTTCGTTTATAAAAGGTGAAGTTGTTAGAGACGGTATGGTT AGGTTAAAGGATAGAGATGTTTGAGGATGCTGGATAGACTATGAGGAGAAAAAAAGGGTA ATAGAAATNAGGTAGGAGGAGAAATAGAGAAGGGGCAAAGCGAGGAGAGTGGGGTTGGAA TATGCAGAATAGAAGCTATATTCAGAGAAATGCTGGGTAGGCCGGGATTAGGGAAGGTGA AAAAGGACGCGGGTAGAGCAGCGCCCAGAACGATGAGAGTGGATTACAGTCGGAGGTGGG GGTGTAAAGAGCTATGGGAAGGTGGTAGTGGAGGGAGAGGGAAGGGGAGAGAAGAGAGGA GAGAAGAACGCGAGGGGAGGAGAGGAGGCGAAGCGGCCGGAGAAAAAAACGGAACGGCCG GGGCACCCGCCCGCAAGCGCCCCCGGGGAGCTGAAGAAACAGCGTGAGACCGCAAAAGAA TATAAGCGAGAAGAAAAGGAAAAGAA |
| GenBank Accession | AL941678 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:20941958 - go to primer design |
| BLAST e Value | 4e-16 |
| Hit Clone Code (BAC ID) | K17N15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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