SimpleSearch - Line and FST details
Line specific information
| Line ID | 265C05 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3338, 10797 |
Gene hit At1g14330
| Sequence (A. th genome BLAST matches underlined) | >35-K014998-022-265-C05-8409 GATCATGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGTATGACGTACA ATTGTAGAAAAACAAAAAAATAAAAACTATGACGTACATAGAGTTTTACTACAAAGCAAT TTAACATCCTTTGACCAGAGGAAAAGAAATAAACAAGTGAAAGTACTGAAACTTTAGAAC ATTTAATTAACTTCAAAACACTATGGGATCCTCCCTATAGAGAGGCAAGGAGACCGCCGT CCATGGATTCCTTTACGAGAGTTTCATGATCGTAGCGGGATAGATATGCGATAACGTGCT AAGAGATATGGACATTGTCCGCTCAGGGAGATTCTCAGCTCCTGAGAAATCGCCCGACAT GCTGATTCTTCTGTGGTCAATTGAATGACCTGAAAATAATATCATGTATCTTTGGGAACC AAGAGAGAAGAAAACACTATGGGATCC |
| GenBank Accession | AL942343 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4892606 - go to primer design |
| BLAST e Value | 4e-50 |
| Hit Clone Code (BAC ID) | F14L17 |
| Hit Gene Code | At1g14330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Galactose oxidase/kelch repeat superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit F7H2
| Sequence (A. th genome BLAST matches underlined) | >35-K014990-022-265-C05-8409 NTGATCCATGTAGAAATTTCCCGGACATGAAGCCTTTACAATTGGAATAACTTTGCCTGT CTTACATAAAGTAACCCGTAAAAATTACGATGCTTAACGTGACACGGAGAAATATGAATA AATTATTTATCCAACATATGATCCGAGAGATGTATTTTTCGTGTCAGTACACATTCATTC TACCATATAACCAACTAAAGAAAGACATGGAGAACGATTTTTTAATAAACAAAATAGATA GTCGAAAATAGATTAATTAACAAGACTTTGATTTAGCTAACTTGATTGCTTGCAAAACTG GTCTTAGATCTATGGGATCCTCCCATNAAGGGGAGANNNNCNNNNCCNGAGANACNGCGC GAANGGCGAATGTACATGAGGCAAAGGAGAGACCTGAAAAGAAAACCATGTATCCGTGCC AACCAATAGAGAGGAAACCCCCCCGCGTAGCCGCGCATTCGCTGTCGGGGGGGGGCGCGT GGCGGCGCGCCCGGAGAATGGGAAGCGGATCGGCGACGGGA |
| GenBank Accession | AL942342 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:5388937 - go to primer design |
| BLAST e Value | 3e-103 |
| Hit Clone Code (BAC ID) | F7H2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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