SimpleSearch - Line and FST details


Line specific information

 
Line ID 271H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N426014)
Segregation Analysis 50:47:35
Confirmed for Hit At4g31690
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g31690

 
Sequence (A. th genome BLAST matches underlined) 
>80-K015071-022-271-H10-8409
CACCGAGAATACTTTTGGGCTCTTGGCTTTGATACAGCGACCGGAATGGAGAATGCATCA
CCCTCTGTCTCGACTAACCAACACTCTCTTCCAGCCTCTTCTTCCCGGATTCCAGAGCTA
CCTCGCAGGCAATCTTTCTTTCTCTCTGTCTGACTGAACTGACATATAGTGTCATGACGG
CTCTGTCTGTCTGTTGCAGAAAATTCGTGGGAACTACTTCTCTGAGCACATCGTGGGGAA
ACACAAAGGCAAGACTGTAACGTTGAGAACAGATGCTCCGAGAGAGAACATGCGAAGTAA
TGATGGATGGTCATATACTCACGGAAGGATGGACAGAGCTCTCTGAGGCACATGGTATTC
TAATCGGCGACT
GenBank Accession AL943138 [GenBank]
Graphic View Graphic view of gene At4g31690
Predicted Position of Insertion Chr4:15345214 - go to primer design
BLAST e Value 5e-96
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transcriptional factor B3 family protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit MIL23

 
Sequence (A. th genome BLAST matches underlined) 
>80-K015064-022-271-H10-8409
TTGATCCATTGTAGATTCCTCGGCACATGAATACCTTTACAATTGAATATTGAACAAATA
TTGTTTTTACTCTACTTTTATTCTTTTTTTTTAGTTGTGGCAAACTATTCTACACTTTAT
TTGGGTCTTTTCTTTTTCCAGGGTACTAAAACAAGTTATCATTGTTTTTATCTGATTGGG
GTGCAAGAAGATGAACCCACTCTATTGGTTTATTCTAACTTTAAACACAGACTCTTGGTT
TCTATGGGATCCTC
GenBank Accession AL943137 [GenBank]
Graphic View Graphic view of sequence AL943137 of line 271H10
Predicted Position of Insertion Chr3:7630752 - go to primer design
BLAST e Value 4e-66
Hit Clone Code (BAC ID) MIL23
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37