SimpleSearch - Line and FST details


Line specific information

 
Line ID 285C06
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 1563, 3922, 3964, 9882
Note

Gene hit At4g16250

 
Sequence (A. th genome BLAST matches underlined) 
>43-K015277-022-285-C06-8409
CTGATCCATGTAGATTNTCCCGGACCATGAAGCCTTTACAATTGAATCAAACACATAGAA
TGCTATTACATTACCATCCGGTTACATGAAAGAGACAACAAACCTTAAGATCAAAAGGAT
CTGCTCCTCCCGAAATATTAATACAACTCTGTACATTCGCATTCTACTAGGATTCTCTGC
CATCTCAATGAGGCTCTCTATGGGATCCTCCCTCTAGTGAGANNCNNNNNNANAAATGNN
NANCCCCCCCACCTTAATTAAACAACGGTAAGGGAACCAACGCATAGTAAACCCACNCCA
TGTTGGTGGTGATAGACAGAAATGTCCAGCTGATCCGTAACATTCCCACGGAGGTCAAAT
CCATGGCTGTCTACGGTGACCAGATAAGGCTCCAACAGGTTCTCGCACAATTTGTGCTCA
GCATTGCCCGTTATGCACCCATGGAACGCTCGGTAGAGCTCCATNTATGCCCGACTCTGA
ACCAAACGGCTGACCGATTCTCCGCTGTACCCTTGGACCCCAGGTACATCCCATCCTTCT
A
GenBank Accession FR807208 [GenBank]
Graphic View Graphic view of gene At4g16250
Predicted Position of Insertion Chr4:9196492 - go to primer design
BLAST e Value 4e-90
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phytochrome D
Insertion Classification CDSi
Confirmation Status failed

Gene hit At2g18245

 
Sequence (A. th genome BLAST matches underlined) 
>43-K015290-022-285-C06-8409
CTGATCCATGTAGAATTTCCCGGACATGAANGCACTTACAATTGAATAAGACCTCTATAC
TTTTTTTTTTCTTCTTGTGTTTCATGAAAGAGAGAACAAACCTTAAAATAATGAGGATCT
GCTCCTCCCGAGTCAATGATACAACCCTTAATCCTTTCTACTAAACCCTAGATACCAATG
AAGCTC
GenBank Accession AL944845 [GenBank]
Graphic View Graphic view of gene At2g18245
Predicted Position of Insertion Chr2:7938245 - go to primer design
BLAST e Value 2e-30
Hit Clone Code (BAC ID) T30D6
Hit Gene Code At2g18245 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 285F01


Last Updated on 10.06.2021 13:37