SimpleSearch - Line and FST details


Line specific information

 
Line ID 285C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N427296)
Segregation Analysis 50:47:42
Confirmed for Hit At2g03220
Parent of DUPLO pair none
Parent of pair(s) 4136, 4176, 9908, 11230, 93434, 93440, 93442

Gene hit F24J8

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015277-022-285-C08-8409
TTGATCCATGGTAGATTTCCCGCACATGAANGCCTTTACAATTGAATATATATCACAATT
GTCTGTGTATGTAAAAGACTTGGGAGTCTCTGGCGTATAGTGAGTATAGTGAGACGAGTT
TGACTCGAAAGTGATTTTGACTTAATTGTGATAGGAGTACTTGCGTATATTTAGTTGATA
CAAACAAAAAATATTACTTGTTACTCAAGTTTTGTTATCATAAAAGTTTTGGGTTTATGA
TTTTAACTACATTGACTAATCATTAAAATCTCATATTTGTGAATTTATTCCACCAATTAA
TATTGATCTTCATGTTGGTTCGCTAATCGCTATCTATCGAAGGGTTGAAAACGTTGGGAC
TTGAGAGGCAAGCTTAATTAGGCGCTATGGGATCCTCCCTATAGTGAGN
GenBank Accession AL944847 [GenBank]
Graphic View Graphic view of sequence AL944847 of line 285C08
Predicted Position of Insertion Chr1:7473631 - go to primer design
BLAST e Value 1e-152
Hit Clone Code (BAC ID) F24J8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g03220

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015290-022-285-C08-8409
NTGATCCATGTAGATTNTCCCGCACATGAAGCACTTTACAATTGAATATATCCTGCAACC
ATGTTTGACAGGATAATCTTGTAGACGAGATGCTTGGTCTACATTTGGATATGTAGCTCA
AGGTCTTGGAGGTTTAAAGCCTTGGATACTCTATAGACCCGAAAACCGTACAACTCCCGA
TCCTTCGTGTGGTCGGGCTATGTCGATGGAGCCTTGTTTCCACTCGCCTCCATTCTATGA
TTGTAAAGCGAAAACGGGTATTGACACGGGAACACTATGGGATCCTCCC
GenBank Accession AL944848 [GenBank]
Graphic View Graphic view of gene At2g03220
Predicted Position of Insertion Chr2:970673 - go to primer design
BLAST e Value 2e-101
Hit Clone Code (BAC ID) T18E12
Hit Gene Code At2g03220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation fucosyltransferase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37