SimpleSearch - Line and FST details


Line specific information

 
Line ID 285E07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12125
Parent of pair(s) none
Note

Gene hit At4g15080

 
Sequence (A. th genome BLAST matches underlined) 
>53-K015290-022-285-E07-8409
NTGATCCATGTAGAGGTTCCCGGACATGAAGCGCTTTACCACTCGACATATCGTATGCCC
TATGGTCCATCTGTGTATATCTGGAGGTCCCTCTATAAGCGTTAGCATTCTTGCAGAGAT
GTTACACTTCAGTACGACCCTATCCGAATTGCATACTTTAAGTCTCATACATTGTAGAGG
TGTGTGACAACACAATATCTACACACTCCATGAGGGGCACTTATAGCATATACCATAGAT
TGTGGAGATTAAGTGCCTAATGGGATGCTACCTGTCCTGCCTTTGAGAGCGGTTGGAACT
ATATGAGTTACGTAGTTGGAAGGATCCAGTTAAGTTTACAACGAAACCTATGGGATCCTC
CCTTNACTGAGTAAAAACAATCTGCATAATAACATGGTAAGATTGCTTACCTGTACATAC
GATGCAACACCATCTGATCCAGGAACCAGATTCTCCTCACAGAACCAGCCAATTCCTATG
GGATCCTCCCTATAGTGAG
GenBank Accession AL944887 [GenBank]
Graphic View Graphic view of gene At4g15080
Predicted Position of Insertion Chr4:8609812 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DHHC-type zinc finger family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g57880

 
Sequence (A. th genome BLAST matches underlined) 
>53-K015277-022-285-E07-8409
CTGATCCATCGTAGATTTCCCGGACATGAAGACCTTTACAATTGAATATTTTTTTGCTCC
TTCAATTTTCACACCTCCATGGACATGGCAGGCATCTAACACTATAAGCGCTTCATCGGG
GCACTGATCCCATAGCCTGCCTATGATATAGCTCATTCCTTCTACCTGTACAGCTGACAA
TGATTGTCCGACATTCAAATTCCATTACTGAGCGCGCTATGCCACACATTATGCATCAGA
CGTGACCTTGGGCGTATTTGATTCTCTATGCATCATAACCTGTAGCATTCAGTATCCCCA
ACTCCAGTACACCGATATTAGGCTTCCATAGTTGCTTCGCTGTTGGTCTAAGATCACTGC
TGTAATGCGTAGACTCATCGAGAACGTGATACCCTCCTTCCAAACATATTCTCATGTGAA
TCCTGCTATGGGATCCTCCC
GenBank Accession AL944886 [GenBank]
Graphic View Graphic view of gene At3g57880
Predicted Position of Insertion Chr3:21432182 - go to primer design
BLAST e Value 6e-80
Hit Clone Code (BAC ID) T10K17
Hit Gene Code At3g57880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 285E06


Last Updated on 10.06.2021 13:37