SimpleSearch - Line and FST details


Line specific information

 
Line ID 287A05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 78985, 78987, 78988

Gene hit F8D11

 
Sequence (A. th genome BLAST matches underlined) 
>33-K015278-022-287-A05-8409
CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATGTATCGACCTATT
GTATTTATTAACTGGTGCATCCAGTTGGAACCGCTTTGGCATGCGTTCTGGCGTTGGCTA
TGGTATCCTCCCTATCATTGATGAAATTGATGCGATTTGTGACTATGGTTATTCGATGCA
CATCTACATAAGGAGTGGCGTGTGAGAGATTGTATGAATAATATGCTCTCAATAACTTGT
ATCTAGAATCTACAAAGCTCTGGAATTCGTTGGTTCAGACATTTCATCAAACACATTTTG
GGTGGAGAAAGTCTGAGATCAATCTCAAGTTGATCAGAAAGGAAATAGCACTAAGAAATC
CTAATTTAGAAGGGAATCATGCATATAAACACTTTGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL945103 [GenBank]
Graphic View Graphic view of sequence AL945103 of line 287A05
Predicted Position of Insertion Chr1:15988356 - go to primer design
BLAST e Value 2e-83
Hit Clone Code (BAC ID) F8D11
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g06600

 
Sequence (A. th genome BLAST matches underlined) 
>33-K015292-022-287-A05-8409
CTGATCCATTGTAGATCTTCCCGGACATGAAGCACTTTACAATTGAATATATGTGTACAC
AAGTATCTAATATCATTCTTCAGATATATCCTATGGGATACTCCCTATAGTGAGTTTTCA
TCTCACTTATTAGTAGTTACATTTGTTATAATATAACTTATGTTACCTTTAAGTTTCTGT
TTAATGTAAGAATCACACTTTTTCTCCAAAACAACTTATATTTGCTTGGTTAATTTATAA
TCTTTTTTTAAGGTTACCGGGGAAAATTTCAGTACCACAAGTACCTTTTCTACACCAATC
CGGCATCCAAATGTCATAACAAATTAAAATGGCTTCCTCTTCCTCTTCTCCGACGCCTAT
GGGATCCTCCC
GenBank Accession AL945104 [GenBank]
Graphic View Graphic view of gene At4g06600
Predicted Position of Insertion Chr4:3667765 - go to primer design
BLAST e Value 2e-123
Hit Clone Code (BAC ID) T11G11
Hit Gene Code At4g06600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification 3' region
Confirmation Status unknown


Last Updated on 10.06.2021 13:37