SimpleSearch - Line and FST details


Line specific information

 
Line ID 290H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N427834)
Segregation Analysis 50:39:26
Confirmed for Hit At1g66530
Parent of DUPLO pair 503
Parent of pair(s) none

Gene hit At1g66530

 
Sequence (A. th genome BLAST matches underlined) 
>48-K015353-022-290-H06-8409
TGATCCATGTAGAATTTCCCGGACATGAATGCCTTTTCTATTGTATTATATCTACCTACT
GACTATGCACCTACTGGACTATTTCTTTCTTAGGTACAGGCTGGAGATCCTGTTTACCGC
CAGGCATGGGCTAAAATTTGCGAAATCAGCCGAAACGAGTTTGCCAAGGTTTACAAACGC
CTTCGAATCGAGCTTGAATAAAAGGTCAAGGAATAACTGGGACGTATACTAAATTATTTG
AGATATACATGAATGGGTAATGGAAACTACATTGTTTTATGACAGGGAGAAAGCTTTTAC
AACCCTTATATCGCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTGAAGAAAGT
AAAGGTGCTCGTGTGATATTCATTGAAGGCTTTAAAATCCCACTCATTGTTGTAAAGAGT
GATGGTGGTTTTAACTATGCCTCAACTGATCTAACTGCTCTTTGGTGGGTTATCTTTATG
TTAATCTGGAGTTTAGTAGCAATCTTTGGCAAATGCATCTCATATATTATTGGCTTGGCC
CAGGTATCGGCTTAATGAAGAGAAAGCTGAGTGGATTATATATGTGACCGACGTTGGCCA
GCAGCAGCATTTTGATATGTTCTTCAAAGTAGGGTTTTGATAAATATTCTCATTGTTTTT
CACGTCTTGTGAAATGTTGTCTTAGTTGAAACTCAGTCGTAACTGGTGGTTTTCCTGTAG
GCTGGCAAAAAAGCAGGATGGCTTCCAGACGATGATAAAACT
GenBank Accession AL945646 [GenBank]
Graphic View Graphic view of gene At1g66530
Predicted Position of Insertion Chr1:24820970 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F28G11
Hit Gene Code At1g66530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Arginyl-tRNA synthetase, class Ic
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37