SimpleSearch - Line and FST details


Line specific information

 
Line ID 293C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N428060)
Segregation Analysis 50:43:37
Confirmed for Hit At4g04080
Parent of DUPLO pair none
Parent of pair(s) 11468, 94961

Gene hit At4g04080

 
Sequence (A. th genome BLAST matches underlined) 
>27-K015443-022-293-C04-8409
ACTATCTGATCCATGTAGACTTTACCTGACCTGAAGCACTTTACACTTGAATCTAGGTTA
TATCTTATTTCTATATTAATAACTTAATTTAATGATTTCATGATTAGATAAACTAATTGA
TTTCTATATCACATAAGAATGTACCACTACCGACAGAAGTATCTGTTACTGGCTAAACCA
CAATCTAATGTCTTGAATTTATCACTTAATGATTTGACCATATCCATTCTACTTAACCTG
AAGCTTTACTTTCATGTTCACATTGATGAGCTTCTACCATATCCCGTACCAACGTTAGGA
TACATTCTTATCAAATGATCCAACGTTACGGGGATTGTCACTAATGGTCGATGACATTTG
GATGGTATAATCGTGACACGACATGGACGGGNGGTGGGGATTTTGAGAAGCGAGCCCTAA
AAAGGCTCTTTTAGTTGTTTGCCTTAACATGATCGATCGCTTCTCTCTATGGAGCTTGTT
GTGAAATTCTATGGGATCGTCTTNNNNNGGNTTGTNNNNNACCCTTATTTGGTGCGTATA
TGTCTGTGCTCAAATATCANTTTGATTACAGACTATGAGCCATTTTAGAACATCTATTCC
AGTAAGGACTATATATCACTCTCAACCTTCTAACAGGACCGAGGATTCTAAACTACTCTA
TC
GenBank Accession AL945985 [GenBank]
Graphic View Graphic view of gene At4g04080
Predicted Position of Insertion Chr4:1963768 - go to primer design
BLAST e Value 8e-101
Hit Clone Code (BAC ID) T24H24
Hit Gene Code At4g04080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ISCU-like 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL945985 [GenBank]


Last Updated on 10.06.2021 13:37