SimpleSearch - Line and FST details


Line specific information

 
Line ID 294E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N428188)
Segregation Analysis 50:26:19
Confirmed for Hit At2g03640
Parent of DUPLO pair 12441
Parent of pair(s) none

Gene hit At2g03640

 
Sequence (A. th genome BLAST matches underlined) 
>93-K015444-022-294-E12-8409
AACTTTGATCCATGTAGACTTCCTCTGACATGAAGCCTTTACACTTGAATGGTGATATAC
AACTTACACGTTTAATCTCTAGCTCACATCGCTGGTACTTTAACGATTAAATTCCTAACC
GTTCAATCGTAAACCTGCCTAAAAACCGGTAGCTGCTCCCGAGCGCAAAGTTCCTTCTCT
ATTCTCAAGAACTGCTTCATCTGAAAGCATTATACCACAATGCTGGCTATTCATTCGTAA
ATATATTATAAACAATGAACTAGAAAATTCTTCAACTTGCTATTTGCACACTCGATTATT
CAGAACCACACGTCACCATGATCAAGGTAAATGCATATGTGGTGCAAACTTGCCTATGGA
TGCGACTATTGATCAACTGAATGACCCATGAAAACATTTGGGAGCTGTCATAAATGATGG
TATCCAGGTCAGAAGTGACCCAGGATAGCTATTCTACACATGACCTACAGGAAAAATTAC
TTTGCAAAGTTTGATAACATTTATGAGATGGATCAATCACACGCTGAGAAATCTGCGAAC
TTTCAGGATAAAAACAGCTGACTAGGGCCGGTGCTATGGGATCCTGCGAACCCCCGTAAA
AAAATGTCTCTCAGGTATGCTATATGATGGCATATCAAACTCTCGGCTATAATGTATTTT
GAAGTTCGTGGGTATCTGATCTCCACATGCACAAC
GenBank Accession AL946167 [GenBank]
Graphic View Graphic view of gene At2g03640
Predicted Position of Insertion Chr2:1105525 - go to primer design
BLAST e Value 7e-15
Hit Clone Code (BAC ID) F19B11
Hit Gene Code At2g03640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946167 [GenBank]


Last Updated on 10.06.2021 13:37