SimpleSearch - Line and FST details


Line specific information

 
Line ID 297C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N428448)
Segregation Analysis 50:46:38
Confirmed for Hit At5g21100
Parent of DUPLO pair none
Parent of pair(s) 9687

Gene hit At5g21100

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015513-022-297-C08-8409
NTTTTTGATCCATGTAGATTTCCTCGGACATGAAGCCTTTACAATTGAATATATCCTGTA
CTTCTTTGATGGAAGTGCGTTGGTTTTAAGGAGAACATAATAATGTTTCGCCGGAATAAA
CGTCAATGTCGTTGACGGTGAACGGTGCGACGTATGTTGCCGTCAGATTAACAACCACCA
GCTGGTGTGCCTGTCACGTGCGCAATCAAACCACACGTGTGAGCTTTTAAAGTACACGTG
TGAGTTGAAAAGAAAGAAACTTACTTGAACAGCCAAGTTGAGGGAAGCAAGAGCAGTTGT
GCTATGGGATCCTCCCTTAAGGTGAG
GenBank Accession AL946533 [GenBank]
Graphic View Graphic view of gene At5g21100
Predicted Position of Insertion Chr5:7169887 - go to primer design
BLAST e Value 6e-117
Hit Clone Code (BAC ID) T10F18
Hit Gene Code At5g21100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant L-ascorbate oxidase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946534 [GenBank]


Last Updated on 10.06.2021 13:37