SimpleSearch - Line and FST details


Line specific information

 
Line ID 297G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N428496)
Segregation Analysis 50:41:27
Confirmed for Hit At5g45250
Parent of DUPLO pair none
Parent of pair(s) 4473, 4532, 4594, 9965

Gene hit At5g45250

 
Sequence (A. th genome BLAST matches underlined) 
>63-K015513-022-297-G08-8409
TCCCAACAACTCCAATGATACAAATCGCCTATGTATATATCACGATTCTTCATTCTCGTG
TCCGATCTTGTAACTCGCGGTCCGTCATCAGAAGGCTCATGCTTTCTCGCACTGGCTGAG
GATGTTCCATGGTTGCTATTACCTACAACACCCACTACTGCGTAGCGACTCTCCCTCCGG
AGGGACTTGCAGGACAGCAGCTGTCTTCACACGACTATACATTGGCATTGACTGGTGCTC
ACTTTCGCGCACTGTACTTTNAAGGCTAATGAGATCATGACCTCCCTAAGTTCCATAAAA
GGTTCTATGGGATCCTCCCATAAGGTGAGANNANNGAGNCNAAGGATGNGCCGANGGGGN
GGCGAGGAGACAGGGAGGAGCCCCGGCCGCCAGCCCCCCCACCGAAGGGGNCGCACACGC
GCGACAGCACCGCCCCGCACAAGGAGAGCCCGCCCCCCGGCCCACAAGGGAAGCGGCGGA
CCCGCACAGCCAGGCGAGCGGGCAGCAACCACGACAGAACCACCGGGAACCAAGGCCGCC
CGCGCGCAAACCGCCCCCCCAAGCCCGCCCCGGACGGAAAAACCGCGGAGCCACCGACAC
CGACGCGAAAACCACCGAACGCCCCCGGGCCCAGGGCGGCCCCCCCCCCGCCGAGGGCGA
CCCCGCCGAGACGCCGAAAAAACCCCCGCGGCCCCGCGCGGAAAGCCGCGCGGCGCGCCG
ACCCGCGCCCGCACGACCGCAGCAAAACCGACCCCAGACGAACCGGGGAGACCCCCCCGC
CGGGAAACCACCCGCCCGCCCGGCCAGCAGCACACAGGCCCGAAAAAAGGAAAACACC
GenBank Accession AL946609 [GenBank]
Graphic View Graphic view of gene At5g45250
Predicted Position of Insertion Chr5:18325143 - go to primer design
BLAST e Value 7e-18
Hit Clone Code (BAC ID) K18C1
Hit Gene Code At5g45250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL946609 [GenBank]


Last Updated on 10.06.2021 13:37