SimpleSearch - Line and FST details


Line specific information

 
Line ID 300A12
Vector Used pAC161
Line Availability available as T3 set from NASC (N428716)
Segregation Analysis 50:49:34
Confirmed for Hit At5g06110
Parent of DUPLO pair 1081
Parent of pair(s) none

Gene hit At5g06110

 
Sequence (A. th genome BLAST matches underlined) 
>89-K015599-022-300-A12-8409
TTGATCCATGGTAGATTTCCCGGACATGAATGCCTTTACAATTGATTTGGACATGATATC
AATTGAGGAAAAGAGGTGGATGGAGAGAGAGAATGCAAGAAAAACTCAGAAGGCTAGATA
TGCCCTCGTTTTTTCTGTAGTCTACGTCCCCTAGCGAGAAGGTGGTTGATAACCTCTTTC
GACGGGAGTGCACATTGCCGGATCGCCAGCTAAGGCCGTTGATCCACGCTCAAACCTTTG
TGTACGTCTGTGGGATCCTACCTTCAGTGAGGTTGCCTTTGGGATTCTCCCTTGACGGTG
CTCTATGCCTCGCCTTTTATACATCCTGTCTCCGTTGAGAACCTCTGATTGGAAACACTT
ATTTTTACACTATTGCGGAAACCCAAGGACTCACTCCTATGGATATGTAAAATACAGGAT
TTCCAATCCTA
GenBank Accession AL946927 [GenBank]
Graphic View Graphic view of gene At5g06110
Predicted Position of Insertion Chr5:1842229 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) K16F4
Hit Gene Code At5g06110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DnaJ and myb-like DNA-binding domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37