SimpleSearch - Line and FST details


Line specific information

 
Line ID 301C05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 52114, 89169

Gene hit F21A14

 
Sequence (A. th genome BLAST matches underlined) 
>35-K015558-022-301-C05-8409
CTACTCGAAAATCTTTGCTAACCGTGTCGATCCAATCCCTATGGGATTCTGCCTATAGTG
AGACAAATGTATGGGTGCCTATTACAACATTCAAAAACGATGTGAAGGACTGTCAATCGC
CACTTTTACAAGATTTATAAATGAACATGGGAACCTCAAATATATGGGCTGCTCCATACC
GTCAGAATAATGAAAAAAATAATAAACCTTTGACCACAATTTTATGGTTGTCTACGGCAG
TAGGGATCCTCCCTATNGGGAGACTCCCTATAGTGAGCNAANTACTCGGCTAAAAATAAA
GAANACGGACGAATCCGAACCAAAGCCGTACAAGCGCGAAATACCTTAAGGACAGCCTA
GenBank Accession FR807456 [GenBank]
Graphic View Graphic view of sequence FR807456 of line 301C05
Predicted Position of Insertion Chr3:14197563 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F21A14
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g15245

 
Sequence (A. th genome BLAST matches underlined) 
>35-K114329-0022-301-C05-8409
CCCCATTTGGACGTGAAGGTAGACACATCGAAATAAGATTTCCGAATTAGAATAATTTGT
TTATTGCTTTCGCCTATAAATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACTT
TCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTA
CTCTTTCTTTTTCTCCATATTGATATAAATTTGTATAAATTTGTTATGTATACGTTACCA
TTTCGAGTTTAAATGGTGATAATAGTCGAGATGGACATATTCATCAACGGTTTAGTATGT
TCTATTTTTACTGCAGACAATAAACTGTCGCGTCGCAGACCAACTCTATTTGTATGTTAA
AGCGGTTCGTAGCTAACCTGCAAGGCCG
GenBank Accession HE664479 [GenBank]
Graphic View Graphic view of gene At4g15245
Predicted Position of Insertion Chr4:8707333 - go to primer design
BLAST e Value 4e-86
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15245 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification 3' region
Confirmation Status unknown
Other FSTs Supporting this Hit HE664480 [GenBank]


Last Updated on 10.06.2021 13:37