SimpleSearch - Line and FST details


Line specific information

 
Line ID 304D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N429125)
Segregation Analysis 2:2:2
Confirmed for Hit At2g26820
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g26820

 
Sequence (A. th genome BLAST matches underlined) 
>04-K015570-022-304-D01-8409
TTCCTGGGGAAATGAGTATTTAACTAATAAAAATCTATGTACTATAGCAACTTAAAAAGG
ATAGTTTGTTCGTGATATCGTAATACATTAGATTGTTTGTTAAAGAATATGAATTTACCG
CTTGTGCAATCAACTGTTTGTTTTTCGCCTCCTCCATTTGTAACTTCTCCTTTTCCATTA
GTAAATTCTGTTGCATCTCTGTTATGGGATCCTCCCTTAAGGTGAGA
GenBank Accession AL947435 [GenBank]
Graphic View Graphic view of gene At2g26820
Predicted Position of Insertion Chr2:11440999 - go to primer design
BLAST e Value 6e-105
Hit Clone Code (BAC ID) F12C20
Hit Gene Code At2g26820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phloem protein 2-A3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g03070

 
Sequence (A. th genome BLAST matches underlined) 
>04-K015592-022-304-D01-8409
NTGATCCATGTAGAATTTCCCGGACGATGAAGACCTCTACACGGATTCAATCATCGTCTC
CATGCTTTCGCTGCCTGTTGAATCAGAAGTATGTATGAATGTATAACTTAATGTTGGTGA
GTAGTATGATTAACACTGCCAAGAACCAAATCTAGGTTGGAAGAAATATAATCATCTGTC
ACTAAAGAGTTTTTCATAAGAAAAGCATGAAGATAGTACTATACCATACTCACTCTCTGG
TGGGATAGTGGATTATATTACACATGTGCGGCAGAGTATATGAACACTGCAAATTTTGAA
ACATAAAATCTTACTATACTTGTATAAAGTTGTACCAAAATCCAATATTGGTTGACTTCA
TGAGTTGCAGGCAGAAACCGGGAATGCAATCAGATTCAGATGTATGCAAGCGAGCTTCTG
TCAAAATCTGGTTGTGGCCTGCCTCGTGTTGGAGTCGGCGGTCTCTGGATATTCAGCTCC
TGCAAAAGATAAATTGTGTACTTTCAGTGTCTCTGGTTCGTAGCCAAAAAAAGATATAGC
TACATAAACTCTCCTATGGGATC
GenBank Accession AL947436 [GenBank]
Graphic View Graphic view of gene At4g03070
Predicted Position of Insertion Chr4:1359596 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T4I9
Hit Gene Code At4g03070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37