SimpleSearch - Line and FST details


Line specific information

 
Line ID 309H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N429661)
Segregation Analysis 50:49:41
Confirmed for Hit At3g55810
Parent of DUPLO pair none
Parent of pair(s) 93013, 93018, 93027, 93030, 93032, 93034, 93036
Note

Gene hit At3g55650

 
Sequence (A. th genome BLAST matches underlined) 
>72-K015816-022-309-H09-8409
TATCCTGAAATTTCCCGGACATGAGCCATTTACAATTGATATATGGATGATATCTTCTTT
ATCTTTCTCAGTAAGTGTTGGGAGATCAACTACAATTCCACGAAGATTAACGTTTTTTCT
TTCTCCTANTGGATCCTCCCTATAGTGAG
GenBank Accession AL948121 [GenBank]
Graphic View Graphic view of gene At3g55650
Predicted Position of Insertion Chr3:20647671 - go to primer design
BLAST e Value 4e-38
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pyruvate kinase family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g55810

 
Sequence (A. th genome BLAST matches underlined) 
>72-K015784-022-309-H09-8409
TGATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAACAAATCGAC
ATCATCGCTCTTTCTTTTGTTCGTAAAGGATCTGACCTAACTGAAGTTAGGAAGTTACTT
GGAGAACACTCAAAGAACATCATGCTCATGTCAAAGGTGGAGAATCAAGAAGGGGTCATG
AATTGTGAAAAGATTCTGGAGAATTCTGATGCTTTCATGGTGGCTATGGGATCTCCCCCT
ATAGTGAG
GenBank Accession AL948120 [GenBank]
Graphic View Graphic view of gene At3g55810
Predicted Position of Insertion Chr3:20712633 - go to primer design
BLAST e Value 1e-93
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pyruvate kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37