SimpleSearch - Line and FST details


Line specific information

 
Line ID 313A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N429963)
Segregation Analysis 50:40:29
Confirmed for Hit At3g16490
Parent of DUPLO pair 2783
Parent of pair(s) none

Gene hit At3g16490

 
Sequence (A. th genome BLAST matches underlined) 
>81-K015818-022-313-A11-8409
TGTCCTGTAATTTCCCGGACATGAAGCATTTACATTGAATTGCTGGCTCAGAACTTACCT
TGCGGAAACAGACAAGAACAGAACAAACACGCGATTGCGGTTGCTGCTGCTACAGCCGCG
GCTGCTGACGCAGCGGTTGCAGCGGCCCCAATGGCCTTCTTCCATGCCATGCCGATATGG
GATCCTCCCTATAGTGAGTATTCCGGGAACGCAATGGAGCAGTGGGCCGCATTGTAAATT
CAATCAGGCTTCAATGGCTATTTGGTAAATTTCTTAAAAGCCTCCAACTCACTTTTTTTT
TTTTGAGGGCGCACAGCTTTCTCACGCTCAATATTTGAATTCCGACCTGGGGAGTAAATT
CAAATCTACCAAATATCGCAAACAATTCTTGAATTCCTCATTGGATCCCAACCTCCTGGT
AGGAAAATAATAGGAACCCCTTCGCTTATACTCTCAAAGGGATCCCACCTTTAGTGAGAA
GAACCAGAAAGGTGGCTTCCAGGCCCCAATTTTTTTTACTTTGTTCAACTACGACCCAAG
TTATGGGTCATCTTTACCGACTTATGCTCCCTACAACACTCTGGTGTCACCAACTTACCG
GCAGATCTCCACCGGGGAACCCCACAAAAATTCATATAACTTTTCTT
GenBank Accession AL948523 [GenBank]
Graphic View Graphic view of gene At3g16490
Predicted Position of Insertion Chr3:5605349 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) MDC8
Hit Gene Code At3g16490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation IQ-domain 26
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL948523 [GenBank]


Last Updated on 10.06.2021 13:37