SimpleSearch - Line and FST details


Line specific information

 
Line ID 315H06
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 2113

Gene hit At5g03640

 
Sequence (A. th genome BLAST matches underlined) 
>48-K015820-022-315-H06-8409
TTTCCCGGACTGAAGGCTTTACAATTGAGTATATCCTGTGATATAGTAGCTTATCTCCCA
TATTCCTCTGCTCTGCTCTGTTTTGCTCTGATCTTATAAATCTGCGCTCTCTTTATAATT
AGAATTTCATAATTTTGATGCACTCTTTAACAAGAAAAATCACATACCTTCCTTTAAACT
GTGAATATAATTTCAGGTGCGTGTGGGATAAAAAGATGTATCTACCGGTTTAGATTACTC
GCATTTCCGCGGGTACTAAGATGCTGTGTGACTGAGCTTTAATGTTATGGGTTCATTTGC
CGGAAAGTGTGAAATAGTTGAAGAAAAAGAAGACCGTCAAAACTCGATTGGTTACTCAGC
GAAATCAACCACTATTCCACATTCTATGGGATCCTCCCTATAGTGAGANNAGGACGGCTC
CGGATATGACCCCTTTATAATGAGTAGAAACTGACCGATGAGCTCTGTGAGACGCACTCC
TATAGAGGGTTGCGAGAGACCCCCGTATCGAGCTCCACCATGTTGACCAAAATTGTCTTC
CTGTCCTTGAGTCGTATGAGACTCTGTATGAACTGTTCCCCGGTCTT
GenBank Accession FR807757 [GenBank]
Graphic View Graphic view of gene At5g03640
Predicted Position of Insertion Chr5:927677 - go to primer design
BLAST e Value 1e-176
Hit Clone Code (BAC ID) F17C15
Hit Gene Code At5g03640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At2g04630

 
Sequence (A. th genome BLAST matches underlined) 
>48-K015824-022-315-H06-8409
GGTTTTACGTGGGCGTTGCACAGGTTCTGTTTCACCTTATCTTCTGTTTCCAAGGGTCAA
CATTAACATCATCGTTCTCCTTGATATCAGCATCTTCCTCTACTCCTTCCTACTCACACC
AACACATTCTAATCAGCCTATGGGATCCTCCCTATAGTGAGA
GenBank Accession FR807758 [GenBank]
Graphic View Graphic view of gene At2g04630
Predicted Position of Insertion Chr2:1619697 - go to primer design
BLAST e Value 5e-65
Hit Clone Code (BAC ID) F28I8
Hit Gene Code At2g04630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA polymerase Rpb6
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37