SimpleSearch - Line and FST details
Line specific information
| Line ID | 319A11 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12366 |
| Note |
Gene hit At4g35240
| Sequence (A. th genome BLAST matches underlined) | >81-K015856-022-319-A11-8409 TATCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAACAAATAG CAATACCGAAAACGTTAATAACGTTTATCTCTTAAGATTTTAAACTATTTTATACTATTC GTTTACTGTTTTTTTTACTCTGGCTATGGGATCCTCCCTATAGTGAGACCAATCGATATC GATTACTACATGCTATTTAAATTTCTAATAAGCTTGTTTTGTTCAGATGATAATATAAAA AATCAATTCAACAAAAAAGAGTCAGCCTATGGGATCCTCCCTATAGTGAGATCCCATATT CAGTTTCTTACCTTAACTCTTTTTCGTTTGAAAGAGCCCAAGTGCTTATCTTCAAATCTC TCTAATGGGATCCGCCGAATGCTGAGAAGAATGAAT |
| GenBank Accession | AL949226 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16765598 - go to primer design |
| BLAST e Value | 2e-43 |
| Hit Clone Code (BAC ID) | F23E12 |
| Hit Gene Code | At4g35240 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At5g26667
| Sequence (A. th genome BLAST matches underlined) | >81-K015860-022-319-A11-8409 TATCCTGTAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAACAAATAGCA ATACCGAAAACGTTAATAACGTTTATCTCTTAAGATTTTAAACTATTTTATACTATTCGT TTACTGTTTTTTTTACTCTGACTATGGGATACTCCCGCTGGTGAGAGCAATCGATATCGA TTACGAGATGCATAGAAACAGCTTAAAGCGCTTCGTGATAGTCTCAATATTGTCATCCTC TCTCCCCTTCAACAACAGAAATGGACGCAACGATCAATATATGTGTAACGGGGAGTGAAA CAAGAGCCTATGGGATCCTCCCTATAGTGAGANNCAAGAAATGCANCCTCCGCCAAAATT CATTTGTGTCTCCATGGTAAAGGCCCCCAGGGAGATACCAAACACACCATCTACACCTGG TTTGTCCAAAGCATAAAACCCAATGGTGTCCTCCGGCCGAGAACCCCCCCTTACGTTAAA ACTAACCACAGATACCCTATGCCGAACCCACCAATCGTGAGACCCCCCACCGGCATCCCC TAACCCCCCCAATTTGCCCCTTCGACCGACGCCCCCCCCCCCCAGAAAACCCCCACACAC CCGTAAATCCCCATACCAGAAGCCCACCCCCCCCGCACAACGCCCCCAACCCGTGTGCCC ACCCCCACACACCCCCACCCCCTCCATTTTCCTCTCTTCCCCTTCACCCACTACCCACAA TCCCCCTACCCACCGCTCCCCTACACCCCCACGCACCAACCACCCGCGCCCCCCCGAACG CACGAACACCCCCGAGAAGCCCGACCCCAGACCGCGAACACACAAAATGAGCCCCGCCCC CCGATAACCTCGAATAGTAAGCAAACCCCACCGCAACACGCACCGACCCACAGACGCCCA CAGAGCGCGCAAGACCCGGCGGCAGAAGGAGACAAAGAACC |
| GenBank Accession | AL949227 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:9277681 - go to primer design |
| BLAST e Value | 1e-47 |
| Hit Clone Code (BAC ID) | T7I7 |
| Hit Gene Code | At5g26667 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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