SimpleSearch - Line and FST details


Line specific information

 
Line ID 319C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N430560)
Segregation Analysis 100:92:85
Confirmed for Hit At2g38490
Parent of DUPLO pair none
Parent of pair(s) 89922, 89938

Gene hit At5g41120

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015856-022-319-C08-8409
TGATCTGTAGATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGAAACGCCGCTTG
GTAGACTTTGGCAAACGCGCCGCTACCGAGGAGCTTACCGAGATCGTACTTACCGAACAA
AGCCGACTTATTATCATCTCCGGTGACGTTAACAATGATTGATTCGGAAGAATTAGAGTC
TTCGGCCATTAACAAACAAACAAAAAAAACAGAGCAAAAAAACAGAGTAAAGAGAAACAG
GCTATGGGATCTCCCTTATAGTGAGAGGATNATANGCCTTTGTCGAACCTGAGGATAACA
AGGTGGGAGAGGTTCCGTCAGTGAAACGAACAGTAGTAGTAGTAATAATCGCCATAGACG
ATCAGAGAAAGTTGGAAGAAGGTTTTTGTTGTTTAGCTTCTTCATCTCTGATAGGTCGAA
CACGACAAGCTCGTGCACACGAGAAAAACGATTATAATATGCCACGTTGATTTTTTCAGT
TTGAATATTTTCAAATTTGATAAATTTGCTTAAATTAAACACGACAAGCTGGTTCGGTTT
GGTTAAACCAAATCTGGGTTAGTTTAACTATTTATTAATAAAACTAACCTCGAATATTAC
ACAGTTTATTGTACATTGCAATATTCTTCACCAACACTCCCAAAAGTTACTCAATTCTAT
TAAAATAGAAAATAGTCAAAATACACAAACCCTTCAAGGCTTCAACGTAAACGTTCTATG
GGATCCCC
GenBank Accession AL949249 [GenBank]
Graphic View Graphic view of gene At5g41120
Predicted Position of Insertion Chr5:16458902 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MEE6
Hit Gene Code At5g41120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Esterase/lipase/thioesterase family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g38490

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015860-022-319-C08-8409
TGATCTGANATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAAACGCCGCTTG
GTAGACTTTGGCAAACGCGCCGCTACCGAGGAGCTTACCGAGATCGTACTTACCGAACAA
AGCCGACTTATTATCATCTCCGGTGACGTTAACAATGATTGATTCGGAAGAATTAGAGTC
TTCGGCCATTAACAAACAAACAAAAAAAACAGAGCAAAAAAACAGAGTAAAGAGAAACAG
CCTATGGGATCCTCGCTATAGTGAG
GenBank Accession AL949250 [GenBank]
Graphic View Graphic view of gene At2g38490
Predicted Position of Insertion Chr2:16115069 - go to primer design
BLAST e Value 1e-71
Hit Clone Code (BAC ID) T19C21
Hit Gene Code At2g38490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CBL-interacting Serine/Threonine-kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37