SimpleSearch - Line and FST details


Line specific information

 
Line ID 322A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N430819)
Segregation Analysis 100:87:84
Confirmed for Hit At4g04720
Parent of DUPLO pair none
Parent of pair(s) 81952, 81978, 82008, 82036, 82061, 82084, 82087, 82088, 82089, 82090, 82091, 82093, 82094, 82095, 82096, 82097, 82098, 82099, 82100, 82101, 82102, 82103, 82104, 82106, 82107, 82108, 82109, 82110

Gene hit At2g07633

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015950-022-322-A03-8409
TGTCCTGAAATTTCCCGGACATGAAGCCTTTACATTGACATCACTTATGAAGAACTAAAA
CTGAGGCTGCACTATGGGATCCTCCCTATACCGAGATCGATATATACTATACTGCTGGGA
TTGGACTACTATGGCATCCACCATCTCCTGAGCTGTGGCGTTACTAACTACATATCCAAT
ACTTTCGTCGGAGAGAGCACCAAAAAGCCAAGACTTTCACAGTTGATCGGAGGCAGGCAT
CTAAGTCTGGGAATCTCCTCTTCTGCATGGCTAAGGGCGTGGTTGTTGTATTTGGTACAC
CCGAATTCACTGGCCGA
GenBank Accession AL949609 [GenBank]
Graphic View Graphic view of gene At2g07633
Predicted Position of Insertion Chr2:3331131 - go to primer design
BLAST e Value 5e-34
Hit Clone Code (BAC ID) T17H1
Hit Gene Code At2g07633 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NADH-plastoquinone oxidoreductase subunit
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At4g04720

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015946-022-322-A03-8409
TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATTTCCCGCTTTTGTCGG
TATCTATATTCGCAAACATGGTTTTAAGACCTTTAATCTCCTCTTCTGATAGACTCTCCG
CGATAACCTGAAAACAGAATACACAAATTACAACCAAAATTTCAGGCACCAGTAGATATG
AGGCATTGCAATATGGAGCATAGAGAGATTGCAAGTGGATAATTGAAATGCAAAATTAGT
AATAAAGAAAGATAATTTCATAAAAAATTTCAGCCACTTCTTTACCTTTAGAGCTATGGG
ATCCCGCCTCAATAGTGA
GenBank Accession BX942958 [GenBank]
Graphic View Graphic view of gene At4g04720
Predicted Position of Insertion Chr4:2395512 - go to primer design
BLAST e Value 1e-139
Hit Clone Code (BAC ID) T4B21
Hit Gene Code At4g04720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation calcium-dependent protein kinase 21
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37