SimpleSearch - Line and FST details
Line specific information
| Line ID | 322B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430832) |
| Segregation Analysis | 50:46:41 |
| Confirmed for Hit | At5g19430 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g19430
| Sequence (A. th genome BLAST matches underlined) | >26-K015946-022-322-B04-8409 TTTCTTAGAAGAGGTTTCTGATCCCGTAACATGCTATTTAGAGTGAAGTGACTTGCCCAG GACGATAGGACATGCGATCTCTTGTGGCGAACTGCAACGTACCGGATCTGTGTTGCCTCT TGCCGCTTGGTTGTCAGGCTTTTTGTCTTAGCACACGCTGTATGAATATATCTTCGTTGC ACGTCTCTCAGACTGAGTTGGGCTGTGTCCCCCTACTCTACTCCGGATTCCTTACGCTGC ACCAAAAGAGGTAACTATAGCCTCTGACTCCCATCCGCTAACACATCGATTTATTGTCTC TAGTCAGATTTCGCTGCCATGAGGATCGATACAGAGATGTAGGCAGGCCATGCTACGAAC TTCGTGATTTGGGGGCCGAACCACCGCTATCCTGTCGATGCTGNCCTTTTATTGAGTACA TATTCTCGTCGCATGATGAAAATTTTCTAATTTGAAATATGGTTGCTTTGTGTGNCGGTC TTGTTTCAGATTTGGAGCTGATTCTGTCCATGATGCTTCTGCTTCTATGTGGAAATGTAT CTATGGATCCCCCCCNTTATAGGAAGAAAAGGGAACAGNGAAGGGCTTGTATCCCACTTT GGGGATTTAGTGGAGC |
| GenBank Accession | AL949629 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:6553671 - go to primer design |
| BLAST e Value | 6e-46 |
| Hit Clone Code (BAC ID) | F7K24 |
| Hit Gene Code | At5g19430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g09330
| Sequence (A. th genome BLAST matches underlined) | >26-K015950-022-322-B04-8409 TGTCCTGTAATTTCCCGGACATGAAGCCATTTACAATTGAATATATTCGAGGATCTATTC AATAATCGACTCTTATGTAGAGAGGTGGCGAAACCCTAACAGGCTATATAGATACCAGGC GCTTCCCCCAGGAGGCTCGCTACATGCGCTCTCCTGTGCCGACCCTGCCGATTACTGGAT ACCTGTCCGCCTTTCTCCCTTCGGTAAGCCGTGGTCGCTCTTCTCATAGCTACACGCTGT AGGAATCTCACTTCGGTGCACGTCGTTCACTCCGAGCTGGGCTGTGTGCACCAACCCACC GTTCAGGCCGACCGCTGCACCTAATGGGGGAACTATCGTCTTGAGTCCAATCCGGTAAGA CACGACTTATCGCCACTGGCAGGTGCCACTGGCAACAGGATTAATACAGCGAGGTATGTA GGCCGTGCTACACAGTTCTTGAATTGGTGGCCTAACTACGGCTACACTGTGCGATCTCGC CATTAGTGAGATCATAGACGCCTCGCATGCCGAAAAGATGCTTATATGAAACATGGTGGC CTTGTGTGCCAGGTCTTGTGATCAGATGGAGACCTGAGTCTGTCCATGATGCTTCTGCTA CTATGTGGAAATGTGCCGATGTGTCCCACCCAATAAGTGAGAAAATGGAGCAGGGAGGTC TTGTAGCCCAGTTTGGGGATTTAATGGAGCAGTGA |
| GenBank Accession | FR807864 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:2893034 - go to primer design |
| BLAST e Value | 4e-19 |
| Hit Clone Code (BAC ID) | T5E8 |
| Hit Gene Code | At5g09330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAC domain containing protein 82 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
