SimpleSearch - Line and FST details


Line specific information

 
Line ID 322C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N430851)
Segregation Analysis 50:49:39
Confirmed for Hit At5g05280
Parent of DUPLO pair none
Parent of pair(s) 12530

Gene hit At5g05280

 
Sequence (A. th genome BLAST matches underlined) 
>83-K015946-022-322-C11-8409
TTTCCCGGACTGAAGCCTTTACATTGAAGCCAGCAAATGGTTCCCGGCGGGGTGATGACG
TGGCAACGTAACAGAGCTTCATGAGGTCACTTTCAATGTTGAGTGTTTGCTTCACCTAAG
TAGGTTTTCTTCTTTCTGGTTTGGTATATATATTTTTGTTTTGTTTGTAAATTACTGTTT
ACAATGACTGAAGTTTTATCCACGATTACTTATATAATCTTTCTACTCTTCTACGTTATT
TCCTTTTTTTTTTTTGTTGGGAAATCCCAAACAAAAACCAACCTTTGGGTCCGAAAAACC
AACGGGTTTGGGATCCCCTCTTTAAGGGGGGAANNNNNNNNNNNNNNNNNNCTTTTTTTT
TAATAAAAAACGGCCTTGGTTCCACCCCTTTTATAAAANNNNNNNCCNNNNNNNCNCAAC
AAAACAAAACACAAC
GenBank Accession AL949652 [GenBank]
Graphic View Graphic view of gene At5g05280
Predicted Position of Insertion Chr5:1565550 - go to primer design
BLAST e Value 2e-117
Hit Clone Code (BAC ID) K18I23
Hit Gene Code At5g05280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL949653 [GenBank]


Last Updated on 10.06.2021 13:37