SimpleSearch - Line and FST details


Line specific information

 
Line ID 323A08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12323
Parent of pair(s) none
Note

Gene hit At5g40220

 
Sequence (A. th genome BLAST matches underlined) 
>57-K015951-022-323-A08-8409
ACACCTATCTTCACGCGTNTTTNCACGATCAGCGAGAGTGATGAATANTTTTNCAGACNT
ATNGCNATCTCCNTATAGTGAGAGNNNNNNNNNNNNNNCCCCCCNNNNCGTTTTTTTTTT
GenBank Accession FR807887 [GenBank]
Graphic View Graphic view of gene At5g40220
Predicted Position of Insertion Chr5:16079560 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) MSN9
Hit Gene Code At5g40220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AGAMOUS-like 43
Insertion Classification 5' region
Confirmation Status unknown

Gene hit At5g23050

 
Sequence (A. th genome BLAST matches underlined) 
>57-K015947-022-323-A08-8409
TTTCCCGGACCCATATCTTTACGCGTTTTTTCCCGATCAGCGAGAGTGATAAATATTTTT
TCAAACCCTAGGCGAGATACCAATGATTGTGCGGACATGGCGAAACTCAGACTCCACTGC
AGGGTATGATTGGCCACGGATCCGGATATACCGAGAGCGCATCCTCTAGAATGTTGTTAA
TCCTGAATTGTGTTGGGGCGTGAACCTTATTATATGCTTTGAGAAAAACAAATGTTACTT
ACTATTAATGTATCGTGCGTCCACTTATTATTTTCCAAACATGAGTCTATCTAAGTAT
GenBank Accession AL949734 [GenBank]
Graphic View Graphic view of gene At5g23050
Predicted Position of Insertion Chr5:7732986 - go to primer design
BLAST e Value 9e-42
Hit Clone Code (BAC ID) MYJ24
Hit Gene Code At5g23050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation acyl-activating enzyme 17
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37