SimpleSearch - Line and FST details


Line specific information

 
Line ID 327D07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12064

Gene hit At5g04560

 
Sequence (A. th genome BLAST matches underlined) 
>52-K015979-022-327-D07-8409
ATGAAGAATGAATAAAGTGAATATTCACTGGGCGTTATCAATATGGGCCTGAGGCCCAAA
TTATATTCACAAGGACCTTGTTGCTTAAGCGTATTTTGTTGTGAATTGACATTATACCTA
TTAACATGGTTTAAATTGCTAATTTTCATATAAAGCAACAACGCTAAACCCAACTTTTGT
TGGATATAAATCATAACTTATATATGTTCATTACAATCTTACTAAATTTAATGTTTTGGT
CTTCTTCCTATATTTAGATTTTAAAGTATGTCAACACGATTTTTAAATGAAATTTAATGT
TGCAAACTTGCTTCTTCATGCCAACATTTGACCGAATTACATAAAGGAAGTTCAATGCTA
AAATCGTATTTTTGTAAAACGCTCATAATCACTATTTTCGCTATGGGATCCCCCCCTAAT
AGTGAGAANNNNANNNANNANNNNNNNANNNNNNNNNNNNNANNNNNNNAANNNANCNNN
ACCAAAANCNAAANNAAAAAAANNNAAACAANNANAACAGGGNCCAAACCCCCACAACCC
AAAAACACAACNCCCACANCCAACCCCCCCCCCCAACACCACCACACTCCACACAACAAC
AAAAACNCCCCACCAAACACTCCCACCANCCATAACCTTAACCCTCCACCACATTACTTT
TAAAAGAACCAATTCATTTCCCATTTAAACTTACAAACATTTCACCCCCTTTTCATTCCC
CTTAACCCAATATTAATGACCCCCCCTACCCAATAAAAATTTCCCCCCAAGCACTTATCC
ATTTCCCTTT
GenBank Accession AL950290 [GenBank]
Graphic View Graphic view of gene At5g04560
Predicted Position of Insertion Chr5:1309141 - go to primer design
BLAST e Value 1e-170
Hit Clone Code (BAC ID) T32M21
Hit Gene Code At5g04560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HhH-GPD base excision DNA repair family protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit AL950291 [GenBank]


Last Updated on 10.06.2021 13:37