SimpleSearch - Line and FST details
Line specific information
| Line ID | 330F08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431652) |
| Segregation Analysis | 100:99:97 |
| Confirmed for Hit | At5g65550 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2785, 97566 |
Gene hit F25I24
| Sequence (A. th genome BLAST matches underlined) | >62-K016045-022-330-F08-8409 CGAGGAAGATGTCCAAATTAGAGTTTCTGATTACTCTACTAGGTGACTTGTATGACAACT ACACTCCCATTTTATAATCATACTCGCCTCCCAGGTGAGCGAAGGACACCTTCTTCCCAA GCTTACAGGCTCCTTATGAGATCTATAGTCTATGCAACTCAATCCTCTTCCACCAAATTA GTGATGCATCGTACAAGATATTATCTCTTGAGCCCTCACTGTACATACTGCATGACAACG TAGAAGAGCCTCTAGAGACTGCTGAATACCACTTTTCGACTCCCTGCTGATATTAGTTTA AATTCAATCTAACAAATCGTGCCTTCAAAAATCTGAAGAACATGTCTTTTTATTCTTAAC GCCGGTGGGACCATAGACGAAATCAACAATGTTGAAGGTTGGAGGCGGATTTGGCCGACT TTGTTTTTGATGGGAGTTCGTGAATGGCCTTCAAAACTGCAATGGGTTCAGTTGATCTCT |
| GenBank Accession | FR808041 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:6672501 - go to primer design |
| BLAST e Value | 2e-30 |
| Hit Clone Code (BAC ID) | F25I24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g65550
| Sequence (A. th genome BLAST matches underlined) | >62-K016036-022-330-F08-8409 TATATCCTCCGACCTTTCCGTGAATTTGCTTTCTTTGCCGATAAGACAAACCGTCTACCA TCTCCCATAGAACGCTGAGGCCACCACTGATGTGCCGGATACTCACATAGCTTATCTGAA GACAGCATTTGATGGGCTTTCTGAAGCTTTCACTGAGTTTTTAGAAGCTTCCTAACCTCA CTGGATAGTGTATGATATCTTGCTCCATTGCGTCCCGCCTATCGCTGAGATAGCTCGGGG TGAGACGAGCCATCTTCGTGCACGTTCGACGCAGCTTCCATCATCGTCCTCTGGGGGTCA ACGTCATCCTGCATTTCAAGGACATGACCCTCGAAAGACTGCTGAAGATCTTATCGTGCC TCCACCATGGGTCCCGTTTGAGACCAACATAGTTTACCGTCTCTTTGAAGCTAAGAGGAT CATGGAGTATCCCACGGCAGGTGTAACTGGAGTTGAATTGAACGACAACTGTAGATTGGG TTTGGCTTACGTTGGCTCTGAGGTTATTGTGATTAGATCATGTATGGAACTCGAACCTGA GTGGATTCAATTGCTCAGTAAACTCCAAGGAAAGCCTGTGATTCCAATTGGTTTACTCCC GGCTACACCAATGGATGATGCAGATGACGAGGGAAACATGGTTAGACATCAGAGAATGGC TATG |
| GenBank Accession | AL950706 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26199655 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | K21L13 |
| Hit Gene Code | At5g65550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-Glycosyltransferase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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