SimpleSearch - Line and FST details


Line specific information

 
Line ID 338G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N432433)
Segregation Analysis 100:75:53
Confirmed for Hit At2g36220
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g36220

 
Sequence (A. th genome BLAST matches underlined) 
>71-K016137-022-338-G09-8409
TGATCATGAAATTTCCCGGACATGAAGCCATTTACTTGTCTTGTCTGATTTTTTTGAGTG
GAACTCGTTTTGAAAAGTCGTTGGTGATGACGTGGCAGCTGATCAACGTTTTTATTCAGA
AAGAAACACGGCAACGCGAAAGCGGTGATTTCACACCCACCGCACTGTTTTTGTATTCTT
CTAGAGTAAGCCAAATATGAATGAATATGAAATGATCTAGAAATTGGAAGTGAAGAAACT
TAACCACGTGTGCATCTGACAATGAATCATGATACTACAGACGAGCCAGGACATGCAGAA
AAACATGCGAATACCGAACGCTGGGCTGTCATAATCTGTCGAATAGATAGATACCGGCCT
CTTATTTTACTGAGTGATAGGAGAGATGACCTCTCTCTCTTATAATTAGGTACCGAGGGA
GCTGCCNTATGGAGAGAAACGTTCCGAAGGCCAAAGATACACCGCCATCTCTGAAGCGAG
ACGTTTCGACATGAATAGATACTTGGCAGAATGTTTACGTTACTGTGCCTCGATGAAACA
AGAATTATGCGGGCTGAGCTCAGAAACGATACGCGATTAGCCTTTTAGTGAGAAGCGTTG
CGAGCTTGGATTTCAGTAGGGATTACAATTGATAATCCCAGAGATTCCTTCCTGTGAGTA
TTTACCATCAAAGAAGGAGTTGTCGCTAGACTACCCTATGGGATCCCCCCNTTAAAGGGA
GAAAGGTTTACCCTTATTTCGCTTACGCATCAGACCCTA
GenBank Accession AL951817 [GenBank]
Graphic View Graphic view of gene At2g36220
Predicted Position of Insertion Chr2:15193456 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) F2H17
Hit Gene Code At2g36220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL951817 [GenBank]


Last Updated on 10.06.2021 13:37