SimpleSearch - Line and FST details
Line specific information
| Line ID | 341D04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N432680) |
| Segregation Analysis | 50:44:34 |
| Confirmed for Hit | At4g25100 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g25100
| Sequence (A. th genome BLAST matches underlined) | >28-K016162-022-341-D04-8409 GATCCTGAAATTTCCCGGACATGAAGCAATTTACAATTGCTGATCCATCATACTCACTAC TTTGAGTTTTGCATTTGAATCTGAAAGCATTGAGATAAGAGTAAGGAAGAAGTTAATATA TTTATCTAAAGCTCTTAAACATTTGAAACACTTACAAGCAAGCCAGGCCCAGCCAGCTCC AAACTGAGTGGCTGCAGCAGCATTGAACTCTTCATAGAACTTCTCATAAGAAGTGAAATC TCTTTCAAGCAAAGCAAGAAGCTCTCCTGATGGTTTTCCTCCACCACCTGGTTTCATTGA CTCCCAGAAGAACTCGTGGTTCCACGCCTATAAACATAACCAATGGATCATCAGCTAACC AATCACACACCCATTTTATAATCTCAAACTAAAAATAGGTTTGTTAATTATCACCTGAGC AGCGTTGTTGAAAGCAGGGAGGAGATCACCATTGTTGTAAGTGCTGTGGATAATGTGCTC TAAGGGCTTGCCTTCAAGCTCGGTTCCAAGAACCTGTTTCTTGAGGTTGTCCACGTAAGC TCTGTGATGTTTTCCCCAGTGAAACTCCAGAGTTTGTTTGCTCATATGCGGCTCCAAAGC ATCCTTTCCAATTTTATATCAAAAAAACATTTCATCATATTGGCTATTGCTCTCACTCAT GACTCAACCAATAGGTCCACTAT |
| GenBank Accession | AL952154 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12885129 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F13M23 |
| Hit Gene Code | At4g25100 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Fe superoxide dismutase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g17895
| Sequence (A. th genome BLAST matches underlined) | >28-K016153-022-341-D04-8409 TTTCCCGGACTGAAGCCTTTACATTGATGATACCTCGAAGTTTTAATCGAAGGTGGTAAT CGACATTTGGATCCCTGGGTACCCTGTCCTCGTCGAATGTAATGATCTTATCTTATATAT CTGAAAGTTCTTGCCACTGACAATGAGATCGTGCCCCGTCACCTACGACTTTGGAGATTG CACGTACATCCTCATGCTTTGAAAACTTGCTGGGAAAGACGTCTTTTTTCTCCATCCTCC CCGGGGGCGCTGGTGATGGTTTTCCACCACTGTCGGGTTACGTATCCTCCCCGAAGGACT TTCGTTTCCACCACTGTTGGCATTTGCAGGGGCCCCTCTCCTTTTCCACTATCTTCCAAT GTATTGTCTCATAGTTGGGCTATGTTAGCCAATGATCGCCTCAGCAATGACCCTGTGAGC AAGAAGCTCATTTGCCCTGTGGTCTTCGCAGACTGTATCGTTGTCATTTGTGGAG |
| GenBank Accession | FR808229 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:9940634 - go to primer design |
| BLAST e Value | 0.001 |
| Hit Clone Code (BAC ID) | T6K21 |
| Hit Gene Code | At4g17895 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ubiquitin-specific protease 20 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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