SimpleSearch - Line and FST details


Line specific information

 
Line ID 343E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N432889)
Segregation Analysis 50:48:37
Confirmed for Hit At2g29100
Parent of DUPLO pair none
Parent of pair(s) 9985, 10005, 10056

Gene hit T32M21

 
Sequence (A. th genome BLAST matches underlined) 
>69-K016155-022-343-E09-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGAAACGATAACTCC
TTACTCAACAATTAGCCCAAATAAAACATCCATAATGCATTTAAACTATGAGATGCTCCC
TATATAGAGAGGATGGGCCATGAGAATGAGAGAGATATCGTGCGTCATCTCTTACGTGAG
AGCTAATATTGTATCTTTCCACTGGCTTAGTACACTGGGGCGAAGGGACCTCTTCTTCCA
CGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTCGGCAGAGGCATCTTCAA
CGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTTCCTTTTCCACTA
TCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGTTTCCGGATATTA
CCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTT
TGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGA
GTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGGTCTGTTAGGTCCT
CTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGGG
GenBank Accession FR808338 [GenBank]
Graphic View Graphic view of sequence FR808338 of line 343E09
Predicted Position of Insertion Chr5:1307196 - go to primer design
BLAST e Value 4e-22
Hit Clone Code (BAC ID) T32M21
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g29100

 
Sequence (A. th genome BLAST matches underlined) 
>69-K016164-022-343-E09-8409
GATCATGAGATTTCCCGGACATGAGCCATTTACAATTGATATATCCTGAAACGATAACTC
CTTACTCAACAATTAGCCCAAAAAAACATCCATAATGCATTTAAACTATGGGATCCTCCC
TATAGTGAGAGAATAGTCGAAAACTATTGGAGACATGTCTTATGATACCTCTACCATTTG
AACTATTTATGTAAATAAATATTGTCTTATTACTTTGCAACTATGGGATCCTCGCTATAA
TGAG
GenBank Accession AL952461 [GenBank]
Graphic View Graphic view of gene At2g29100
Predicted Position of Insertion Chr2:12504333 - go to primer design
BLAST e Value 9e-36
Hit Clone Code (BAC ID) T9I4
Hit Gene Code At2g29100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate receptor 2.9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37