SimpleSearch - Line and FST details
Line specific information
| Line ID | 344C05 |
| Vector Used | pAC161 |
| Line Availability | line died - no seeds available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4997, 5038, 5121, 5131, 8578, 10251 |
Gene hit At1g23480
| Sequence (A. th genome BLAST matches underlined) | >35-K016238-022-344-C05-8409 GAGGATCTTCACATAGAGAGCGAGAGATTTGCTTATGAACAACGCCGATTGCGAATACAA CAGCCCATAAGAAGGATCTTTCCCTGCTGTGCCTGTATCACGTAACCAAACAATTAGCTC TTCTTGTGTTAAACCTTCAAGCTCTACTAGCCCACGATAGCTGTAAATTTGCTTTAATCA CTCTATCTTAATATACTCTGATTTCTAACCGAGCGAAACAAGGATTTTGTATCGTGAACT TCGAGCTCTCCGGACTGATCGCCTACGAGTGCTTAATTGACAAGAATGCAAGAGATGTCA CTAAACTACCATTTTGTGGCTGAGCAAGAATCTGGATCTTCAATACATGCTTTCTTTGGA TTCAATGGAACCGCGAGGCGTTGGGGAGAATCGCAGCTTTAAACGAAGCTGGAGGATGGA AAGATCGAACAACCGTAGAAGATATGGATTTAGCAGTAAGAGCTTGTCTTCATGGTTGGA AATTTGTCTATGTCCATGACGTCGAGGACCTACTACTATAACCCTTTTAAACTCNAGCAA AACATAACAAGATTTTCATTCAAGACATTATTAAGTAATCTAACATTTCAGGTGAAAAAT GAATTGCCAAGTACATTCAAAGCATACAGGTTTCAGCAACATAGATGGTCTTGTGGACCA GCTAATCTATGGAGGAAGATGACAATGGAAATCTTACAGAACAAGAAAGTGTCCGCCCTG GAAGAAATTGTATCTCATATACAATTTCTTCTTCATAAGGAAGATTGGTATACACATCTT CACATTTGTCTTCTACTGTCT |
| GenBank Accession | AL952546 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:8334800 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F28C11 |
| Hit Gene Code | At1g23480 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cellulose synthase-like A3 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At1g61667
| Sequence (A. th genome BLAST matches underlined) | >35-K016232-022-344-C05-8409 TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATAACAGGAGGATAACAAACAG GAGGATCTTCAAAGAGAGAACGAGAGATTTGTTTATGAGCAACACCGATATCGAAGAGAA CAAGTCCAGAAGAAGGATCATTCACTGCAATGCCTTTAACAGGTAACCAAAGAAAAAGCT CTTCTTGTGTTAAACCTTCAAGTCCAACAAGCCCACCATAGCTTAAATTTGCTTTAATCA CACGATCAAAATATACTCTGTTTTCGAACCGAGCGAAACAAGGATTTTGTAGCTGAACTT CGAGCTCTCCTGTCTTATCATCTATGGGATCCCCCCTAAATAGTGAGGAGNNNNNNNNNN ANNCNNNNNNNNNTTTTTCTTTTAANTNNANNNATCTTGAATCAAAAANAATCCATAACT CTCNTNCCCTTTCTGCTATAAAATCATCACTATAATCAGAATTCTCAATACCAACTATAA ACCCAACCATTNAATAATTCCCAAATTACTTCCTTATTATTACNAAATTATCCATATCTC TTCCATCCTCCCTATAAAAATAAAAATCCACA |
| GenBank Accession | AL952545 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr1:22768088 - go to primer design |
| BLAST e Value | 4e-158 |
| Hit Clone Code (BAC ID) | T25B24 |
| Hit Gene Code | At1g61667 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | serine protease, putative (Protein of unknown function, DUF538) |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
