SimpleSearch - Line and FST details


Line specific information

 
Line ID 344G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N433006)
Segregation Analysis 60:59:58
Confirmed for Hit At4g15090
Parent of DUPLO pair none
Parent of pair(s) 3891, 3894, 4259, 8333

Gene hit At1g06430

 
Sequence (A. th genome BLAST matches underlined) 
>47-K016232-022-344-G06-8409
TGACAGAATTGTACCTGGCGATGGAAGGACCAGTCATGACTGATGGGAAGAGCAAAAGCT
TGGTTGCTTACCATGAAGGTGGCCATGCCATATGTGCGTAAGTCACCAATCATATTAAAT
GATGTGTGTGTTATCAAAAGCCTAAATTTAAGTTCATTGTTCGTTCTTGCAGAACATTGA
CTCCAGGGCATGATGCTGTTCAAAAGGTCACGTTGATACCACGAGGCCAGGCTATGGGAT
CCTCCTTATAGTGA
GenBank Accession AL952613 [GenBank]
Graphic View Graphic view of gene At1g06430
Predicted Position of Insertion Chr1:1961332 - go to primer design
BLAST e Value 7e-101
Hit Clone Code (BAC ID) F12K11
Hit Gene Code At1g06430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FTSH protease 8
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g15090

 
Sequence (A. th genome BLAST matches underlined) 
>47-K016238-022-344-G06-8409
TGTCATGAAATTTCCCGGACTGAAGCCTTTACAATTGAATATATCCTGTCCGGAATGTCG
ACCCTATGGGATCTTCCCTATAGTGAGACTCATCAACAATTCCGATATCTCTGTTGCTAT
GCGGATGAACTACAATGTCACCCTTATAGTCATCCCCTGCATCACGAGCCTGATTCTCTT
GGTGCTCCATCCTAACCGTAACCACATATGGAGTCACTACCACAGACGAAAGCAACGACC
CCACTATGGGCTTCACTTGAAATAGATAACTGAAATCTTTCTACTACGCCTATCCTAACT
ATACTGAGATACTGCGTCCATCATCTTGATGGCTGTGTTAGGATTCACATTCCTATTCTA
TTAGCATCACTATAAATAGACGTTTATCTGAGAATTGGAAACAGAGAATCTACCTATGGT
TTCCTCTNTATAGATAAGCTAAATCGACCCTCGGTCTACTGAGAATGTATGAGGTAAGTT
ATTGGGAATAGATGACTGAGTTATGTTACCCCCGTTAGAGCGAGATTTTCATCATGCCAT
TGAGGCGTATGAGACTCTGGATGAACTGTTCGCCAGGCTTTACGGCGAGCTCTGGTATCT
CCGCGACGTCAATTACTGCCTACAGTGAAAATCGGGGTTCTGAAGTGAATCCTCATCAGA
AAACTA
GenBank Accession FR808414 [GenBank]
Graphic View Graphic view of gene At4g15090
Predicted Position of Insertion Chr4:8614937 - go to primer design
BLAST e Value 9e-42
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FRS (FAR1 Related Sequences) transcription factor family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37