SimpleSearch - Line and FST details


Line specific information

 
Line ID 347F07
Vector Used pAC161
Line Availability available as T3 set from NASC (N433283)
Segregation Analysis 75:75:53
Confirmed for Hit At5g17930
Parent of DUPLO pair none
Parent of pair(s) 72759

Gene hit At5g17930

 
Sequence (A. th genome BLAST matches underlined) 
>54-K016241-022-347-F07-8409
TGTCCTGTAGATTTCCCGGACATGAAGCCCTTTACAATTGAATTTTGAAGGATCTGAATA
TAGGAGCTGAATAGAGAGAATAACGGATCTGAATAGACCAAGGAACAAGACGAATTTTGA
AGAGTTTCTTGAAATGGATACACCAACTGTAATATCTGGAGACCAGGATGCTGAACTTGA
GAGGAGGCTCGCAAAGAAGCTCAAGATAAAGAAAGGAAAACTAAGGGGCATGGATGATGG
ATTGAATGATTTGTTCGAAGGACTTCCATCTGTACTTGATTCAATGGGATCTGAACTCGG
TGATTCCCGAAAGAAACGTAAGAAAAAGAGATCATAAGAAAAACAGGACCATGAGGATGT
CGATGAGCTATCATAACCCTCAAAAAACTAACTATTAAGCGTGAATACTGGGAAGATCTT
CATGGACCTATGGGAACACCCTTGTACCGAGGGGCAGGAATAACACTTGATTCGACCAAC
TGACCCCATTTTCTTCATCATTAGCACGCNCAGATTCTACTAACTACATCACCTCTATCA
CTAGCATTAGAACTACCGCTATGGGATACCTCCTAAAAGAGAGAGTGCGGACGATACGCA
TGCAAACAAGGTGGATAACACTCTCTATTGGTTCACTTCTAAGGGATGTACTGCCACTGG
TTGATTATAGAATCTGGTCACTGTCTCAAAAATTTATAAAACCCCACCAGCAACTCATAA
TAATCCAGAGTGTTTCATGA
GenBank Accession AL952998 [GenBank]
Graphic View Graphic view of gene At5g17930
Predicted Position of Insertion Chr5:5943485 - go to primer design
BLAST e Value 1e-158
Hit Clone Code (BAC ID) MPI7
Hit Gene Code At5g17930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MIF4G domain-containing protein / MA3 domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952998 [GenBank]


Last Updated on 10.06.2021 13:37