SimpleSearch - Line and FST details


Line specific information

 
Line ID 347G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N433295)
Segregation Analysis 50:49:35
Confirmed for Hit At1g16910
Parent of DUPLO pair none
Parent of pair(s) 5434, 7575, 89784

Gene hit At1g16910

 
Sequence (A. th genome BLAST matches underlined) 
>55-K016241-022-347-G07-8409
GTACTTTTTCTTTTTCTTTCCAAATGACGAGGACAACACGAGCAATCAGGGCCACTGCAT
AGTAGAAGGACCCCACCGACTCTAATTTTTTATTAGCAACAAAAAACCCGCGACTGGAAC
ACGTTTTGCCAGTATTTCATGACCAAAATGCCACCATCTCACGTATGGGATTGTGAATCA
AACCACATCCTCAATTTCCTCCAAAGTCCGGACCAGTTTGGTAAAACAAAAGTTAATTTC
CAAGGATGCGTTTTCTTCGGACAGAAAGAGCCACCACGAGAGTGTATCTGCCTGTTGAAA
CAGGCGTGGGGAAGCTTAAATGTTTTGATCGGACGGCTGAAAACACCTTACGAGGAGAAC
GGTGGTTTAACGAAGAAAAACCCTTTTGCCCGGGGAGGGATTAGGATTTTTCTGAGGGAA
TTGACAGGTTCACAGGCGAAGGCGATAGGAGTTTTGTACAAAAAAAAGAAGCTCCTCGTA
GTTGTTGGAACGGAAACTATGGGATCCTCCCCAAATAGGAGACTCTGNATGAAATGGCCG
CCANCCTTCTACGGGGAGTTCTGTTAGGTCCTCTATTTGAATCCTTGACTCCATGAGAAT
TGGGGATCCCCTAG
GenBank Accession AL953015 [GenBank]
Graphic View Graphic view of gene At1g16910
Predicted Position of Insertion Chr1:5785387 - go to primer design
BLAST e Value 2e-150
Hit Clone Code (BAC ID) F17F16
Hit Gene Code At1g16910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37