SimpleSearch - Line and FST details


Line specific information

 
Line ID 348H10
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 8768
Note

Gene hit At2g20380

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016243-022-348-H10-8409
TGATCTGTAATTTCCCGGACATGAAGCCTTTACATTGAGATCTATAAAATAGGATCCCCT
CGCATGATGGTCATACTCATGGCATGTCGCTATGGGATCTGCCCTGATTTAGCAGGAAAG
TTAGTAAACTTTTGAGCTTTGTTGCACAGGATGCTGAGGAGCTTGCGCCTTTATTTCCGA
AGCTTCGGTCATTACTTTCTACGGAGGTTGTGGCTTTTAAGCCAAAGGTTTCGGAAGGAT
ATGAAGTGTTAGGATTTTCGGTCAATACAGATTTAGGTCGAGGTTCTTTTTGCATGATAG
AGGAGATTACCTATCATTATGACCCCAGTGTAAAGTTTAGATGGAGAAGAAGACAGGGAG
GAGTTTGGAGATCATTAGTGGGATTAGAAGGGCTACCTAAGTTTGCTATGGGATCCTCCC
TTATATAGTGAGAAATCATCANNAGCCCACATGGGTCATGCCCTCTATATAATACTTTTG
TATTATTATTATTTCTTATGTCCACATTATAAACAAATACCCTCCAAATTGCACTTTCCT
TCAAACTTATTCGACAGTA
GenBank Accession AL953155 [GenBank]
Graphic View Graphic view of gene At2g20380
Predicted Position of Insertion Chr2:8795391 - go to primer design
BLAST e Value 1e-164
Hit Clone Code (BAC ID) F11A3
Hit Gene Code At2g20380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Galactose oxidase/kelch repeat superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 348G10

Gene hit At1g02180

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016247-022-348-H10-8409
CGAACCAATGCCCATTGGCTCCTCTCCGTACATATTTTAAGTTTGAGGAGGACATGGCTA
TTCGGTAGATTAAATGGTGCTGTCACATTTCCACTATAGTAAATCGGGGCTCGACTACGA
TGTGCAATATGAAGACTGTATCAGCATATCCCCCATGGTCATGCCTCTATATAATGCTTT
GGATCACACCCATTCTTATGACCCATTATAAACAAGTACCTCCAAATTGCACTTCCTTCA
AACTTATTCGACAGTAGACTATGGCATCC
GenBank Accession AL953156 [GenBank]
Graphic View Graphic view of gene At1g02180
Predicted Position of Insertion Chr1:414638 - go to primer design
BLAST e Value 1e-40
Hit Clone Code (BAC ID) T7I23
Hit Gene Code At1g02180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ferredoxin-like protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37