SimpleSearch - Line and FST details
Line specific information
| Line ID | 349G11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433491) |
| Segregation Analysis | 90:86:84 |
| Confirmed for Hit | At1g63650 |
| Parent of DUPLO pair | 12208 |
| Parent of pair(s) | none |
Gene hit At1g63650
| Sequence (A. th genome BLAST matches underlined) | >87-K016244-022-349-G11-8409 TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGATCACTAATCAC GTCCATCTATCTACATGGCTAATCACATCCATTGTTGAGATCACTAATCACATCCATTAT CTCAAGCAATATCCCGTCTCTCCAAGCGCATCTCAGCTCAATAACCACCTCGTTACCTAA TGAACTGATCCTTAAGTTATCCGTTAGACCAGCATAACCGATGTCAGCTGGTTCATCTTC TCCTACATTCACATCACTCCCCTTCCTTTTGACTGTACATACAATTCGCTGATGCTCTTT CCTCCTCATCATCCGGTGTCTTCCTCTTCATCATCGTGATCCGTGTCTCTGTATCAGCAG ATTCTCTACAAGATTCCTACTCTTGAACCCGTTTCTGTAAATCTTGAAGATACTCAATTG TATCATCAAGAATCCACACTTTATCAATCTGTAGAATCAGCAAGAGACTCAAGCTTAGTT CCTTCAGAGCATTATATTTAAACATGTCTTCTCCCTTAATCAAGAGATAAACATAAAACG TTACTGAAACAGATTTGCTATGG |
| GenBank Accession | BX890996 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:23602540 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F24D7 |
| Hit Gene Code | At1g63650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g23330
| Sequence (A. th genome BLAST matches underlined) | >87-K016248-022-349-G11-8409 TGATCTGATATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGAGTATATTGGTGA TTAGCTTCGAGTGCGTCTATCTCCTTAGACATTGCTTCACACCACTCTTTAATTAAAATA GCATCTTTAAAATGCTTAGGTTCATTGCTATCAAGGATTGCTGCCATAAAAGCAATATGA TTTGCAGAATAACCAGAGTTAGTCAGAAAATCTGAGAGAGGATAAAGAGTCTTACCAGAG ACCGAATCGGCGGACAGAGAAGTGGGGAGACCAGAGGGTAGAACTTGTGAGGGAGAGTGT ATATTATGAGATGCTGTTTTCTTCTTCGATGTAGTGTTTGTGACAAAATCTTTAAGAAGA ACAGACTTCTTCTTTTCTCTACAACCTTTGCCCAATAACTCAGGAAGACCCGGAGATGAA GGAGTAGAAGATTCGCCTGTACTTAGTAATTCAGTCGTATCTGAAGCTGACAAGTCAGAT GTGGATCGATCGATCGACCTATGGG |
| GenBank Accession | AL953271 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9929278 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T20D16 |
| Hit Gene Code | At2g23330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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