SimpleSearch - Line and FST details
Line specific information
| Line ID | 353A05 |
| Vector Used | pAC161 |
| Line Availability | line died - no seeds available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2114, 3643, 3765, 96711 |
Gene hit F23J3
| Sequence (A. th genome BLAST matches underlined) | >33-K016363-022-353-A05-8409 GTCCTGAAATTTCCCGACATGAAGCCATTTACATTGAATATATCCTGACACTGAAGCCAT TTACAATTGAATATATCCTGACATCATACTCACCTATGGNATCTNCCNTATAGTGAGAGG GAGGAAATAGTCATTCCCAATTTTTTTTAGTTTATAAAGGAAAAGGTCCAATTTTACATT GAAATTTTTTTTTTAAGGCAAAACTTTTTGCCAACAAAAATTTTGCCCAAAAGAAGGAAA AAAATTATACATGGGGTACTTTTCTTGTCGGGAAAAATGTCTTTTAATCTCCCAACTTTT AAAAAAGGGGCATTTTATATATCACCTTCGTATGGGGCCGTTTAAAACATGAACTAAACG TTGACTAATTTTTAAAACATGATCTTTCGTTGACCAGGCCAAAATAAACATGCCGTTATC AGCCATTAACGGAATTTCTAAGGTCCGTTATCATCCGTTAACTTTATTAGTCAAGTTTCA AATTGGGGCCCTTTTAACCATCAACTTTTTATGGGGCCATTTAAAACTTGAACTAAACGT TGACTACCATTTAAGACATGAAAAATTTGTTGACCAAGCCAAAATAAACTTGTCTTTATC AGAAGAACCTATGGGATCCT |
| GenBank Accession | FR808603 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:5790731 - go to primer design |
| BLAST e Value | 3e-174 |
| Hit Clone Code (BAC ID) | F23J3 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g52120
| Sequence (A. th genome BLAST matches underlined) | >33-K016362-022-353-A05-8409 TATCCTGTAGATTTCCCGGACATGAAGCCATTTACATATGCATATATCCCACATGTGGAT ATCTCGATGTAGACCATCCCACCTTGCTCCAAACCTTTTCTTACATGCATATTAAACAAT GTCAAAATGGGTAAACCAATCTGACCCAACCCGACCTAAATTACATATAAATTCGAGTGT TATAATGGATGGGTTTGGGAGATCTATGGGATCCTCCCTATAGAATAGATTAATCCCGAG ATATATCGAATATCCATGATCCACTTTGATTTAGAAATACCTTAAAGTTAGACTCTCGCT GATTTGAGAATTTAATTGCGCTTTAAACCTATCATTAGTTCTATGGGATCCTCCCTATAG TGAGAAGAGAGAANNNANNNNTTNCCANTTTTTTTGCAATTCCAAATGGTAAATGTCCCC AGCCTAATAAAAAACCCTTNCACAATCACCGATTTGTTGTCGCTCCCACAACGAAGAGGT CCTCAAGAAACACAAAAACCCACCCGATAACGAGGAAGAAAGTCCCATACCTTNCGCCCG CCTTCCCCCGCTAGTACCGCATGGGGCGCTAACCCCCCCCAAAACTATCCGTCCCATGCC TCCCCCCGACTATAACTACCGCCCCCCATTTCTAGTTCATCGCCTCCCCCCCTATACCCG CCTCTCATACAGATATCCCCCCCCCCCCCACCTTATATCCCCCGGCGCCCTTTTTCCGTC GCGTCCGCGCCCCCCCCGCCCGCCCGCTTTTTCTCCTTATAAACCGCCCCCCCGCGTAGG TCCTCTTCCTATAAACAAGACCGGAGCGACCCCACATATACATATATCCGCCGCCACCAC CAATA |
| GenBank Accession | FR808602 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:21178762 - go to primer design |
| BLAST e Value | 1e-50 |
| Hit Clone Code (BAC ID) | MSG15 |
| Hit Gene Code | At5g52120 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | phloem protein 2-A14 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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