SimpleSearch - Line and FST details


Line specific information

 
Line ID 354E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N433946)
Segregation Analysis 50:41:34
Confirmed for Hit At3g24200
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F26G5

 
Sequence (A. th genome BLAST matches underlined) 
>77-K016364-022-354-E10-8409
TGTCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATGATGATACTCATACT
CAATGGCTCATTCATCTTGAGATCCATCATACTGCATTGCTGCTTGAGAATATGAAAATT
TATTTGTGATGGAATCAACTGCTTGAGACTTTAGCTTTGGATCGTAGTGTTGATGAATAA
ACCGAAAACAGAAGCATGCTTTCGCTCCGAAATTGGATGCTATATATGGAATAAATTAGT
ATTTACGCTATGAGCAGAGGGATGATGTCTTTTGTGATGAGAATTCACAAGTGGAACCAT
ACTTATAGCTATGGGATCCTCCCTAATAGTGAGAAGTAACGTGCATGGGGACGGTGTTCT
GCATTCTGAATCTCACCGAGGACTCCTTCTTCAATGAGAGCCGGCGGCTATGGGATCCTC
CCTATAGTGAG
GenBank Accession AL953786 [GenBank]
Graphic View Graphic view of sequence AL953786 of line 354E10
Predicted Position of Insertion Chr3:15864632 - go to primer design
BLAST e Value 2e-107
Hit Clone Code (BAC ID) F26G5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g24200

 
Sequence (A. th genome BLAST matches underlined) 
>77-K016365w-022-354-E10-8409
TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGTATATTTGTATCTGGTTTTTCTT
TTTCACGAGTGCATAGTGTTGGAATCCGCCATCATTGCTATATTTGCAGGTTTTCTCTCT
GCTTCATAACGTTTGAGCAGATTCGCCTACAATTTAAAATTTCAAGCAATCAATATTCAA
TACAGAGGAAAGGAGAAAATAAACATGAGGTATAAGACTTAGAATCCGAGCACATACCTC
GCCTATATCAGTACCAAGAGCAATGCCCTCTGCTATAGCTTTGGAGAGAGCACACGCATC
TGCAAATCCTATGGGA
GenBank Accession AL953787 [GenBank]
Graphic View Graphic view of gene At3g24200
Predicted Position of Insertion Chr3:8748223 - go to primer design
BLAST e Value 1e-124
Hit Clone Code (BAC ID) MUJ8
Hit Gene Code At3g24200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD/NAD(P)-binding oxidoreductase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953787 [GenBank]


Last Updated on 10.06.2021 13:37