SimpleSearch - Line and FST details
Line specific information
Line ID | 355H10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N434078) |
Segregation Analysis | 50:50:48 |
Confirmed for Hit | At4g10180 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g10180
Sequence (A. th genome BLAST matches underlined) | >80-K016870-022-355-H10-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATATGAAGCCATTTTCAATTGTAATT GTTGGTCTTCTGGGCCAACAAATGTTCACAAGCGGTAACGTCACCGCTCGGGTCTTCGAA CGTCAGATTCGAACTCCTCCTCCCGGCGCTTCCGTCAGTCCCCAAATCTCTCTCTCTGTC TCAATCTCTCAATCTCAATCTCTCTTTTGCTTATCTCTTTACCTTCAATGATAGGTAAAT CGTGCAAGACACTTCTACGAAAACCTATGGGATCCTCNCCTTATAGTGAG |
GenBank Accession | BX001420 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:6346520 - go to primer design |
BLAST e Value | 3e-48 |
Hit Clone Code (BAC ID) | F28M11 |
Hit Gene Code | At4g10180 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | light-mediated development protein 1 / deetiolated1 (DET1) |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit K1L20
Sequence (A. th genome BLAST matches underlined) | >80-K016831-022-355-H10-8409 TGATCATGAGATTTCCCGGACTGAAGCCATTTACTTCTGACCAATTGTGGTTAAGTTATA GTCAACCATTTTGGCCGTCAAAGAAGGCCTCTTCCTCAATTAGTCGCGTATGTTTTAAGC AAAAAACGATTATTACTAATTTACTATAACTATGAAATTAAAAATAAACTTATACCATTT TGGGTTTGACGCTATGGGATCTCCCNTTATAGTGAGANNNNNNNNNNNNNNNGNNNNGNN NTNCNNGNNNNANNCNTNNANGAAGANCNANNNNNNNNNNNNNNANNGNNNNNNNGGGNN NNNNGNNNGNNGGGGNNGGNGNNGNGGGGGGGGGGGNGNGGNGGAGGNGGGNNNGGGNNG GGGGGGGGGGGGGGGTATTTTGGGAANAAGGAGAGGGATGGAGTATGATGAAGTTTNTGT GAGAATAAATGTATGTGATGAGAAGTAAAGAATGTTTTGGATGGTGAAGAGGGTGAAANT ATATTGATGGAGGAGAGGAGAGGGTGGAGGTGATAATAGAAGATGATTGAATATTTT |
GenBank Accession | BX001419 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:26495381 - go to primer design |
BLAST e Value | 2e-76 |
Hit Clone Code (BAC ID) | K1L20 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |