SimpleSearch - Line and FST details


Line specific information

 
Line ID 366H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N435136)
Segregation Analysis 50:50:38
Confirmed for Hit At2g46410
Parent of DUPLO pair none
Parent of pair(s) 2708, 95976, 95981

Gene hit At2g46410

 
Sequence (A. th genome BLAST matches underlined) 
>96-K017040-022-366-H12-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATTGAATATCTCCGGGATT
CTCCCGTGTTGAAGAACTTACACTTAACCAAATACCTTTTATTCCGATAAAAACCGCATA
AAGTGTGTAATTCGGTTAAAGATTCTATGGAACCGAACCAAAATCGTAATTTACACTTTG
ACTTCATGACAAACGTGCTGTAATCAAAATTGAACCAAGCTATGGGATCCTCCATATAGT
GAGACCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACGATGCTCCTCGTG
GGTGGGGGTCCATCTTTGGGACCACTGTCGGCAGAGGCATCTTCAACGATGGCCTTTCCT
TTATCGCAATGATGGCATTTGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAATAAAG
TGACAGATAGCTGGGCAATGGAATCCGAGGAGGTTTCCGGATATTACCCTNTGTTGAAAA
GTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGTAGACAAGC
GTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGGCATTGNAGTCGTAAGAGACT
CTGTATGAAACTGTTCGCAGTCTTTACGGCGAAGTCTGGTAGGTCCTCTATTTGAATCTT
TGACTCCATGGGAATTGGGGATCCTCTA
GenBank Accession BX002768 [GenBank]
Graphic View Graphic view of gene At2g46410
Predicted Position of Insertion Chr2:19049457 - go to primer design
BLAST e Value 2e-64
Hit Clone Code (BAC ID) F11C10
Hit Gene Code At2g46410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Homeodomain-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX002768 [GenBank]


Last Updated on 10.06.2021 13:37